Trichinella spiralis: Tsp_02253
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Entry
Tsp_02253 CDS
T01609
Name
(RefSeq) beta-hexosaminidase subunit alpha
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00511
Other glycan degradation
tsp00513
Various types of N-glycan biosynthesis
tsp00520
Amino sugar and nucleotide sugar metabolism
tsp00531
Glycosaminoglycan degradation
tsp00600
Sphingolipid metabolism
tsp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tsp00604
Glycosphingolipid biosynthesis - ganglio series
tsp01100
Metabolic pathways
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Tsp_02253
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Tsp_02253
00513 Various types of N-glycan biosynthesis
Tsp_02253
00531 Glycosaminoglycan degradation
Tsp_02253
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
Tsp_02253
00604 Glycosphingolipid biosynthesis - ganglio series
Tsp_02253
00511 Other glycan degradation
Tsp_02253
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_02253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsp03110
]
Tsp_02253
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
Tsp_02253
Chaperones and folding catalysts [BR:
tsp03110
]
Intramolecular chaperones
Others
Tsp_02253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
10907813
NCBI-ProteinID:
XP_003378067
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MRLFTLYFIVLLNTGFVKLSFSKFISNRTYGIPWPMPYEFTLDNRNFSLAQESFKFYTTY
SCDILNNAMQFYRKILFPPSGSTTDVTSELLPFTTLKIVVHIPCPPDYPPSNMIENYTLS
LWPNGTGLLESLQVWGALRGLETFSQLVIPADPDEHTTAMLRSANINDSPRFPHRGILLD
TSRHFVPVDVIKTQLELMAQNKFNVFHWHIVDDPSFPYQSDSFPNLSNKGAFSNQRIYKK
IDILKVINYARLWGIRVIAEFDTPCHVQSWADAMENLTSSCDISHLHFNPLTGSLDPTRP
ETYSFMKTLLQEVFSDFPDEHFHLGGDECDLGCWDYNWAIRTFKKEMNFTTLKEVQGYYL
NKLLDLVMEIRPNTTPILWEDGLSDSIKYSDKLIIQMWLGNTRNEQRSRLANVTARGYRA
LVSSCWYLNIIKYGIDWPGYYDCDPRDFNGTVEQKSLVLGGEACMWGEHVDSSNLTPRLW
PRAAAVGERLWSTEMKRNESTTERLENHRCRLLARGYTVEPVNGPGYCYEVAKL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagattgttcactttgtacttcattgttttgctgaatacgggcttcgtgaagctatca
ttctcaaagttcatttccaatcgcacttatggcattccgtggccaatgccttatgaattt
acgttggataatagaaatttttccctggcacaggaaagtttcaaattttacactacttat
tcctgcgatattttaaataatgccatgcaattctatcgtaaaatactgttccccccttca
ggtagcactactgatgtaaccagtgaacttttaccattcacgacgctaaaaattgttgtg
cacattccttgtccacccgactatccaccgtcaaatatgatagaaaattacacgctttcg
ctatggccaaatggcacaggtcttttggaatcgttgcaagtatggggtgccctcaggggt
ctggaaacgttcagtcagctggtgattcctgctgaccccgatgaacacaccacagccatg
ctgagatctgcaaatattaatgattcacccagatttcctcatcgtggaattcttctggat
acatctcggcatttcgttccagttgatgtgatcaaaacccagcttgaactgatggcgcaa
aataagttcaacgtctttcattggcatatcgtcgatgatccgtcatttccttatcaaagc
gatagttttccaaatttgtccaacaaaggtgcattttcaaatcaaaggatatataagaaa
attgacattttgaaagtaataaattatgcccgtttgtggggcatacgtgtgattgccgaa
tttgatacaccttgtcacgttcagtcttgggcagatgcaatggaaaatttgacatcatcc
tgtgatatttcccatcttcactttaatcctctgacgggcagtttggaccccacaagaccg
gaaacgtactcatttatgaaaactttgctccaggaagtattcagtgattttccagatgaa
cacttccatcttggcggcgacgaatgcgacttaggctgttgggattataactgggctata
agaacgttcaaaaaggaaatgaatttcactactttgaaagaagtgcaaggttactatttg
aacaagttgctcgatttggtgatggaaattagacctaatacaacacctattctttgggaa
gatggtttgagtgattcgataaaatattcagataaactgatcatccaaatgtggcttggc
aatacaagaaatgagcaacgttctaggctagcaaatgtaactgcccgtggttatcgggcc
ttggtttctagctgttggtatttgaatatcatcaaatatggtatcgactggcctggatat
tacgactgtgatccaagagattttaatggaactgttgagcagaaatctttggtcctcgga
ggtgaagcttgcatgtggggtgaacatgtggacagttccaatttaactcctcgactttgg
ccaagagcagctgcagtcggagagcgattgtggagcacggaaatgaaaagaaatgaatcg
acaactgagcgattggaaaatcatcgctgccgtctcttagccaggggctacactgtggaa
cctgttaacggtcctggatattgctacgaagttgcaaaattgtga
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