Trichinella spiralis: Tsp_02276
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Entry
Tsp_02276 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K23335
glucose-induced degradation protein 4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_02276
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
CTLH complex
Tsp_02276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vac_ImportDeg
Claudin_2
PMP22_Claudin
TMEM127
DUF2178
TMEM107
DUF2391
Fra10Ac1
SUR7
Motif
Other DBs
NCBI-GeneID:
10907790
NCBI-ProteinID:
XP_003378045
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MIFAFQHPSELPPEPDKADALPLPVSKVSDGISRNFLYNGSRFNGCQKSKGNSYDVEVII
QHCNLEEEYLCGYLMIKGLTDDYPHLTTFFHGEIIGEKHPFLTRKWDADEEIDRKHWSKF
FAFNKYKKMFNSDNFDCLALKQDNHVFMRWKEQFLIPDYQVRDIHGASFAGFYYIALNLL
NGVIEGYYYHKNSEWFQSLNLKYVPELTTSVYEFRQAEELHFSQYEWEKKIGKVVVVCIN
LANVDGKQKPEFLQIYHLGYWRICRESFMDADENMTKVQLEYLSHRMLLMLALHFIALLL
TFVGFGFTINGYLKSNKQSIFAAVIHIAAGICISVCIMQFVCVVEDEMSARVKPTAEGEP
SKYKSYYGISFFLIATCFVLLQISILAELKIFLLPYSSTNDTLVIVPGLKRRLMTSIRQP
APLFYIPQDVDSTGAI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgcgtttcaacatccaagcgaactacctcctgaacctgataaagcggatgct
cttccgttgccggtatcgaaagtgtctgatgggattagccgaaattttctgtacaacgga
agtcgttttaatggctgccagaaaagcaaaggaaactcgtacgacgtggaagtgataata
cagcattgcaatctggaagaagagtatttgtgcggttatcttatgattaaaggtttaact
gacgattatcctcatttgacaacattttttcatggcgaaattattggcgaaaaacatcca
tttcttacgcgcaaatgggatgcagacgaagaaatagatcgcaaacattggtcaaagttt
tttgcatttaacaagtacaagaaaatgttcaattcagacaatttcgactgcttagctttg
aagcaagacaatcatgtttttatgagatggaaggaacaatttttgatacccgattatcag
gttcgtgatatccatggtgcgtcgtttgcgggattctattacattgcattgaatttgttg
aacggtgtgatagaaggctattattaccataaaaattcagaatggtttcaatcgttgaat
ttgaaatacgttccagaattgacgacatcagtgtatgaatttcgccaggccgaggaattg
catttcagtcaatatgaatgggagaagaaaattggaaaagtggtcgtggtatgcatcaat
ttggccaacgttgatggcaagcagaaaccagaatttttgcaaatttaccacctcggctat
tggagaatttgccgtgaaagtttcatggacgccgacgagaacatgacaaaagtgcagctt
gaatatttgtcgcaccgtatgctgctgatgttagcattgcattttattgccttgcttctc
acttttgttggattcggtttcacaatcaacggatatttgaaatcgaacaaacagtccatt
ttcgcagccgtaattcacattgctgccggaatttgcatttccgtgtgcataatgcaattt
gtttgcgttgtcgaagacgaaatgagcgctcgggtgaaaccaactgccgaaggagaacct
tccaaatataaatcttattacggaatttctttttttctcattgccacctgctttgtgctg
ttgcaaatcagcattttggcagagttgaaaatattccttctaccttacagttcaactaat
gacacgctggtgattgtgcctggcttgaagagaaggttgatgacttccatcagacagccg
gctcctctattttacataccacaggatgtagattccaccggtgcaatatga
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