KEGG   Trichinella spiralis: Tsp_02276
Entry
Tsp_02276         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K23335  glucose-induced degradation protein 4
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_02276
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   CTLH complex
    Tsp_02276
SSDB
Motif
Pfam: Vac_ImportDeg Claudin_2 PMP22_Claudin TMEM127 DUF2178 TMEM107 DUF2391 Fra10Ac1 SUR7
Other DBs
NCBI-GeneID: 10907790
NCBI-ProteinID: XP_003378045
LinkDB
Position
Unknown
AA seq 436 aa
MIFAFQHPSELPPEPDKADALPLPVSKVSDGISRNFLYNGSRFNGCQKSKGNSYDVEVII
QHCNLEEEYLCGYLMIKGLTDDYPHLTTFFHGEIIGEKHPFLTRKWDADEEIDRKHWSKF
FAFNKYKKMFNSDNFDCLALKQDNHVFMRWKEQFLIPDYQVRDIHGASFAGFYYIALNLL
NGVIEGYYYHKNSEWFQSLNLKYVPELTTSVYEFRQAEELHFSQYEWEKKIGKVVVVCIN
LANVDGKQKPEFLQIYHLGYWRICRESFMDADENMTKVQLEYLSHRMLLMLALHFIALLL
TFVGFGFTINGYLKSNKQSIFAAVIHIAAGICISVCIMQFVCVVEDEMSARVKPTAEGEP
SKYKSYYGISFFLIATCFVLLQISILAELKIFLLPYSSTNDTLVIVPGLKRRLMTSIRQP
APLFYIPQDVDSTGAI
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgatttttgcgtttcaacatccaagcgaactacctcctgaacctgataaagcggatgct
cttccgttgccggtatcgaaagtgtctgatgggattagccgaaattttctgtacaacgga
agtcgttttaatggctgccagaaaagcaaaggaaactcgtacgacgtggaagtgataata
cagcattgcaatctggaagaagagtatttgtgcggttatcttatgattaaaggtttaact
gacgattatcctcatttgacaacattttttcatggcgaaattattggcgaaaaacatcca
tttcttacgcgcaaatgggatgcagacgaagaaatagatcgcaaacattggtcaaagttt
tttgcatttaacaagtacaagaaaatgttcaattcagacaatttcgactgcttagctttg
aagcaagacaatcatgtttttatgagatggaaggaacaatttttgatacccgattatcag
gttcgtgatatccatggtgcgtcgtttgcgggattctattacattgcattgaatttgttg
aacggtgtgatagaaggctattattaccataaaaattcagaatggtttcaatcgttgaat
ttgaaatacgttccagaattgacgacatcagtgtatgaatttcgccaggccgaggaattg
catttcagtcaatatgaatgggagaagaaaattggaaaagtggtcgtggtatgcatcaat
ttggccaacgttgatggcaagcagaaaccagaatttttgcaaatttaccacctcggctat
tggagaatttgccgtgaaagtttcatggacgccgacgagaacatgacaaaagtgcagctt
gaatatttgtcgcaccgtatgctgctgatgttagcattgcattttattgccttgcttctc
acttttgttggattcggtttcacaatcaacggatatttgaaatcgaacaaacagtccatt
ttcgcagccgtaattcacattgctgccggaatttgcatttccgtgtgcataatgcaattt
gtttgcgttgtcgaagacgaaatgagcgctcgggtgaaaccaactgccgaaggagaacct
tccaaatataaatcttattacggaatttctttttttctcattgccacctgctttgtgctg
ttgcaaatcagcattttggcagagttgaaaatattccttctaccttacagttcaactaat
gacacgctggtgattgtgcctggcttgaagagaaggttgatgacttccatcagacagccg
gctcctctattttacataccacaggatgtagattccaccggtgcaatatga

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