KEGG   Trichinella spiralis: Tsp_02289
Entry
Tsp_02289         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K17425  large subunit ribosomal protein L44 [EC:3.1.26.-]
Organism
tsp  Trichinella spiralis
Pathway
tsp03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Tsp_02289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tsp03011]
    Tsp_02289
Ribosome [BR:tsp03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    Tsp_02289
SSDB
Motif
Pfam: DSRM_MRPL44 RM44_endonuclase Ribonucleas_3_3
Other DBs
NCBI-GeneID: 10907848
NCBI-ProteinID: XP_003378101
LinkDB
Position
Unknown
AA seq 400 aa
MLIVALTTRQIKRPLACRRQRFCRQHKLSSITVHPIFSRYKKKWYRDYIRDLWGRRVLLG
PDKDVPRSSFPSWYAILFRIVALNYNAELFALKSRIGTNLNDDTLRRALIDRSYVIREID
ERKQLLDASSNVEFASSVLTDIQDNTDFIRKAAHDFITSEEKLAKISRQLGIYDLLMADN
FPYNNSLMSSSLRSIVGAILFDGNEAEAGYFVQDFVLTQLINVDINELWYFKEPLKILTA
LLEKNDRGTPEPRILRSSGEFTVTPVYVVGIYCDKKLIAAGESVLIATEMAARDCLKNLW
GLTEKSMKFKFGEQGRQIDLHDFYEMPNQSLNSQLNFKIELSDDLYKEPLTPQQLTIKYK
REIEKTIGTPYRRRLWHFFYPGTLHKTSPRRFIAPKAKTI
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctgattgtcgctctgaccacccgccaaataaaacgtccactagcttgcaggcgacag
cgtttttgtcgccaacataagctttcttcaattaccgtgcacccaatcttcagccggtat
aagaaaaaatggtatcgggattacatacgtgatttgtggggtagacgtgtgttgcttggt
cctgataaagatgtaccgcgttcatcatttcccagttggtatgcaattttatttcgtatt
gttgcattgaattacaacgcagaactgtttgcactaaagagtcgcattggcaccaattta
aatgatgatactttacgacgagcgttgattgatcgatcgtatgtcatcagagaaattgat
gaacggaagcagcttctggatgcaagcagcaatgtagaatttgcttcttctgttttgact
gatattcaggataatacagatttcataagaaaagctgcccatgattttatcacttcggag
gaaaaattggctaaaatttccagacaattagggatttatgatttgttgatggctgataat
tttccatataataattctttgatgagcagttcacttcgatctattgttggggcaatttta
ttcgatggaaatgaagcggaagctggatactttgttcaagattttgttctaactcaacta
atcaacgtcgatataaatgaactgtggtatttcaaagaacctttgaaaatattaactgct
ttattggaaaaaaatgatcgtggcactcctgaacctagaattttgcgatcgtcaggtgaa
tttactgtaacaccggtgtacgtggttggaatttattgtgataaaaagttgattgctgca
ggagaaagtgtgttgattgctacagaaatggcagccagggactgtttgaaaaatctttgg
ggcttgacggaaaaatcaatgaaatttaaatttggtgaacaaggacgacaaatagattta
catgatttttatgagatgccaaatcagtcgttaaattcgcagttaaatttcaaaattgaa
ttatcggacgatctgtacaaagaaccattgactccgcaacagttgacaattaagtataaa
agagaaattgaaaaaactattggcacaccatatcgtagacgtctttggcatttcttttat
cctggaactctgcacaaaacatctcctagacgtttcattgcccctaaagctaaaactatt
tag

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