Trichinella spiralis: Tsp_02358
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Entry
Tsp_02358 CDS
T01609
Name
(RefSeq) putative HEAT repeat-containing domain protein
KO
K04533
huntingtin
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_02358
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02358
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_02358
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Tsp_02358
Membrane trafficking [BR:
tsp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
Tsp_02358
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
Tsp_02358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT_1
Htt_N-HEAT
TFIIS_M
Htt_C-HEAT
Med26
FYVE_2
FYVE
Motif
Other DBs
NCBI-GeneID:
10908268
NCBI-ProteinID:
XP_003378269
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MTNNVQRQRLEFRVREIENELSEMLDKNALNKTKMRKLLEELRTYGGIDVDMLVSTNIGK
TVNRIRTTFVKCPELFENATFLVKKWKKEVNALSTSSPFRLFLMIHSVVRFYYRIKCYLD
LSSPVRHNSCRALFDSIRSNLNNCRAMFEDCDANLLNDNNIKTIVQQIEESIYELNGSDE
TNSKYCSEIRSHAMNLCNSKNCQLLRDILTGKILPANFAKMTTEEMAPEEVKNMRKAVER
DSLKEHMLSNEGSLLHSTTFHCRQCGQRDCNYTVSYEKDGHEAEAVTYVVCNQCGHRKKE
AVPLSKEKAALFYQVAEALSSNTLKQHAEYGKAFGNAFTILFSYCDDPCTDVRILTEETM
NIIIRSCINEWNISRVHSELCKELKRNGSARCIRSAMGKFVEIVELIGIQKRRQFAITLI
PLFEQIIKRPEEMIQDCIGSTIARLLQTLGRYFRDEEIHGLIHSALANLQLQSTLFRRVA
ATFITELCHNSRRRSDMISYWFRYILTKVTKQDCDDVFHLLGNLLTLKMFIPLVLKEQQI
DQQYSTNVGGGQRVKQISSEIFVQLCEAILFYTAVPNDVVNSLALEMLVKIFENSTQTQC
AIWLSKNSVKKSRFFFPSADCDLTSTADVEPVRSESISSASCSDDPTALQQDTAVEQPVL
NISFQGDDCLEKRVQRFSASSDDQSQRSIESVDERLALMEMDEEAKSNQQQSNGRKFDEH
SHSSSTCASVRGFVSQAVASLLISTATAVQSRKWNNDDDQEFKEEMKVLKRFLEILSNAT
RDESNVCIHYTLSSLRRTFSIMQKLNPSEVVNCAHSLLRLASNPYWLVKVKLAECFEELD
FCLISLLEETCYSNLTEKLQPAVLHCLIDQLLLDEDRRVSSAASTSLLKLIPRLYFFGNV
TLVSLNRQYYGRTFSGRQNWLHPDLPTVHNSALDYSSPSDLHYNALLIDDTEHNLSTVID
LLYSTFYKTSAQVFDWFGCIVALDELATAYPPRVYRRAWSTTTTVNGKCLACPLMQHCLQ
LLRTDCFQLDPLISWQRILHFVSTLFAACVVDFESQPTNKKKNIVELYGLTDVAADLIAF
TMQVTSMYWHVVEQRTATPTSTARFVKSGSGSSTTLSSPATIDAETEKKFLGLLGSALQA
LSAVLEAVSVVDFSGYLEDFLFFSKSLMPLMPAQLISTLTQVQLLQIGLIITILIIIISI
LFRFGWLLSFSFFKVIKVLFGTNLHFEKQLRVKRTQDSIVNQATTLQSCSNYEHFLENIQ
THIAQKTARSMMRHDFVEDSLICHVGWLENNYSQYGLRMYTVQSDGRFQAAFVGLICHLL
LVKVNYSVLDPQRRILNLFCQQLEHYIEDDSNIAMHYVVLDLFLLRQQDVGNNELEIQQE
VVIAMLTKALQYAESWDSFNVIMFQLKKFDERRWRKISRDLTDRLLPLLLEGKHSTLNKW
KHLLAVTCLFRILFLHCPGDSLLDRANEVLPSLKANQQLAPWMNYHTDTKPEELIVRLIL
RLSEWYLVSFVDSAVGDVSPNSHQLELQMIVNFYETIFWINQSGMHPKLIAVFRFEEHFV
RIIDQLEIASRTGEAVLLFQLCHISAILCNSEWHLNELISRIISLVGNFGHLQRSAEKSN
EQKHYNNSNNNDGFVVSEMVVAQGGVWDFFRLCRRDGFRTATQPLTTFRNGELRSLMVKF
VNDNLHPVFGFSRRLPPELSGRAAAGCSDTGHSFDKLDVLHLLKTDVSADVGAHTDRWSR
FAKAVQCFPVEDVRSILCDQVGGDCAIFLFFFSHQPFIPFNCSISIVQNISGAALRACLK
LARRRFALSCDGGDQNNCGAAPDREFSRNMPKLFTAGKEAVIFALQNLIRQFPADAVARF
QFSQWEYELLLFIQFQFFSRHVKIVFLRVDLTLPIGYREKIVVEIILFVLFFLCIGVCRL
PQVFSFCLTPFAAFPFGWVPDVKRIGDLCTFSNVPVRFLVHADVLKDFIYRVCLLGWLDD
SSFLYHLHTVFFSFRLVDLEMQADLQLPCSFCDVEKLYESAKLLNRAQIINSNIASGGSI
VTPNLRGETIVICHFVFNLILFHTIYMYFFCFISESFDLVSCMYFVIDLFDHWFKDGPDQ
VPLLLLISTLDAARSADDEFITNVILFGILKCAANLCSSNAESLKMILQVVDHGCKIPFQ
SNKMFMLFGLLQSLRSFPSADVACFLPNIGELILHTFQLMSDRQAVNNVQVCGLDYEVAC
CALACQMMEKLADEHGTVDYLKTLLKSNYCAESSWQDGRIRYGVVCVHGETIQRTFAERN
SCQ
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataatgtgcagcgacagcgccttgagtttagggttcgggaaatcgaaaatgaa
ctatccgaaatgttggacaagaacgctttgaataaaacaaaaatgcgaaaactgttggaa
gaattgcgtacttatggtggcattgatgttgatatgttagtcagcacaaacattgggaaa
acagtaaatcgcatacggacaacttttgtgaaatgtccagaactcttcgaaaatgccact
tttctggttaagaaatggaagaaagaagttaacgcgctgtcaacttctagtccttttcgt
ctgtttttaatgattcatagtgttgttcgattttattatcgaataaaatgttatttagat
ctttcaagtccagttcgtcataattcatgccgtgcattgttcgattcgatccgatccaat
ttgaataactgccgtgctatgttcgaagattgtgatgcgaatttgttgaacgataacaat
ataaaaacaattgtccaacaaatcgaagaatccatatatgaactcaatggcagtgatgaa
acaaattccaaatactgtagcgaaatacgttctcatgcaatgaatctttgcaattcgaaa
aattgccaacttttgcgagatattctgactgggaaaattttgccggcgaattttgccaaa
atgaccacggaggagatggctcctgaagaggtgaaaaatatgcgcaaagccgtggaacgg
gatagtttgaaagagcacatgctttccaatgaaggcagtttgctgcacagtacaactttt
cattgtcgtcagtgtggtcagcgtgactgcaattacacggtttcttacgaaaaggatggt
catgaagcagaggcggtgacatacgttgtgtgcaatcaatgcggccatagaaaaaaagaa
gcagtgccattatcaaaagaaaaagcggctcttttttatcaagtcgcagaggcactcagt
agcaatactttgaagcagcacgctgaatacgggaaagcttttggcaatgcttttacaatt
ttattctcttactgcgatgatccgtgcactgacgttcgcattttaactgaggaaacaatg
aacataattattcgaagttgcatcaacgagtggaatataagccgtgttcacagcgaactg
tgcaaagagttgaagcggaacggatcagctcggtgtattcgttctgcaatgggaaaattt
gttgaaattgtagaattaatcgggatccaaaaaagacgacaatttgctataacgttgatt
ccactgtttgaacaaataataaaaagacccgaggagatgattcaagactgtattggaagc
acaattgcgcgcttgttgcaaacgttgggacgttatttcagagatgaagagatccacgga
cttatccacagtgctttggcaaatcttcagcttcagtcgacactgttccgtcgtgttgct
gcaacatttataactgaactttgccataattcaagacgtcgatccgacatgatttcatac
tggttcagatatattctaaccaaagtgacaaagcaagattgtgacgatgtatttcatctg
cttggcaatttgttgacgttgaaaatgttcatcccgcttgttctcaaagagcagcaaatt
gaccaacaatattccacgaatgtcggcggcggtcagcgtgtgaaacagatttctagcgaa
atttttgtccaactttgcgaagcgattttgttttacactgccgtgccgaacgacgtggtc
aattcgctggctttggagatgttggtgaaaattttcgaaaattccacccaaactcagtgt
gcaatttggttgagcaaaaattcggtgaaaaagtcccgtttcttttttccatctgcagat
tgcgatttgaccagcactgcggatgtggagccagtgcgttcagagtcgatttcaagcgcg
agttgttcggacgatccaactgcgctgcagcaggatactgctgttgaacagcccgtgttg
aatatctctttccaaggggatgattgtcttgagaaaagggtccaacgattttccgcttca
tctgacgatcagagtcaaagatcgattgaatcggtcgacgagcgattggcactgatggag
atggacgaagaagcgaagagcaatcaacagcagtccaacggacggaaatttgacgaacat
tctcattcttcttccacctgtgcctcagtgagaggcttcgtttctcaagctgttgcatct
ctgctgatttcgacggcaactgccgtgcaaagtcgaaaatggaacaacgacgacgaccaa
gagttcaaagaggaaatgaaagttttgaagagatttttggaaattttgtccaacgccacg
agagatgagtcgaacgtgtgcattcattacacgttgtccagtttacgaagaacattttct
ataatgcaaaaattaaatccgtccgaagtggtgaattgtgcccacagtttgctcagactt
gcctcgaatccatattggctagtaaaggtgaaattggctgaatgttttgaagaattggat
ttttgcttaatatcacttttagaagaaacatgctactcgaatttgacggaaaaactgcag
cctgctgtattgcactgcttgattgatcagttgcttctagacgaagatcgacgcgtcagc
agtgcagcgtcgacgagccttttgaaactgatcccacggttgtatttttttggcaacgtc
actttggtcagcttgaatcgtcaatattacggtcgtacgttctccggccggcagaattgg
ttgcatccggatttgccaactgtgcacaattcggcgttggattattcttccccatcagat
ttgcattacaacgcactgttgatcgatgatactgagcacaatttgtcgactgtgatcgac
ttgctctattcgacattttacaaaacttcggcccaagtgttcgactggtttggatgcatc
gtcgctttggacgaactggcaactgcatatcctcctcgagtatatagacgcgcttggtcg
acaacgacgaccgtcaatggcaagtgtctagcttgtccactgatgcagcactgtttgcaa
ctgttgcgcacggattgtttccagctggatccgttgataagctggcaacgaattttgcat
ttcgtttccacattgtttgctgcttgtgttgtggatttcgaatcccaaccgacgaataag
aagaagaacattgtcgaattgtacggtttgaccgatgttgctgccgatttgatcgccttc
accatgcaagtcacttcgatgtactggcacgtggtggaacaacgaacggcaacgcccacg
tcgaccgcacgtttcgtcaaaagtggctctggctcgagcaccactctgtcgtctccggca
accattgacgccgaaacggagaaaaaatttctcggtctacttggatccgctttgcaagct
ttgtccgcagttttggaagcagtatcggtggttgacttcagcggatatttggaagacttt
ttattcttcagcaaaagtttgatgccactcatgcctgctcagttgatttcaacactgact
caagtacaacttttacaaattggattaataataacaatactaattattattattagcatt
ttgtttcgttttggctggttgttgtcgttttctttttttaaggttatcaaagttttgttt
ggaacaaatttacactttgaaaagcagctcagagttaagcggacacaagattcaattgtc
aaccaggcgacaacactgcaatcttgttctaattatgaacattttttggaaaatatccaa
actcacattgcccaaaagactgctcgttcgatgatgcgtcacgattttgtcgaagacagt
ttgatatgtcatgttggctggttggagaacaattacagtcagtatggtctgcgcatgtat
accgtgcaaagtgatggtcgatttcaagccgcgtttgtcggtttgatatgccatctgcta
ttggtgaaagtcaactattcagttttggatccccaaaggagaattttgaacttattttgc
caacaattggaacactacatcgaagatgacagtaatattgccatgcattatgttgtgttg
gatttattcctactgcgacaacaagatgttggcaataatgaattggaaattcaacaagaa
gttgtcatcgcaatgctgaccaaagcgttgcagtatgcagaaagttgggattcgttcaac
gttatcatgttccaactgaaaaaattcgacgaacgtcgatggcgtaaaatttccagagat
ttgactgaccgtctacttccactgctgttggaaggcaaacattccacgttgaacaaatgg
aaacatctgctagcggtgacgtgcttgttcaggatattgtttctgcattgtcctggcgat
tcgttgcttgatcgtgctaatgaagttttgccatctttgaaagcgaaccaacaactggcc
ccatggatgaattaccacacggacaccaaacctgaagaattgatcgtcaggctaattctt
cgcctgagtgaatggtatctggtcagtttcgttgattctgcagttggagatgtcagcccg
aacagccatcaattggaattacaaatgattgtcaacttttatgaaacgatcttttggatc
aatcagtcaggcatgcaccccaaactgattgctgtatttcgattcgaggaacatttcgtc
cgcattattgatcaactggaaattgccagtcgtacaggagaagcagtgctgttgtttcag
ctttgtcacatctcggctattctatgcaacagtgaatggcatttgaacgaactgatcagt
cggatcatttccctggttggtaattttggtcacttgcaaagatctgctgaaaaatcaaat
gagcaaaagcactacaacaacagcaacaacaacgatggattcgttgtttctgaaatggtc
gtcgctcagggtggagtgtgggacttttttcgcctgtgtcgaagagatggctttcgaaca
gctactcaaccgttgacaacgttcaggaatggagaattgagaagtttaatggtgaagttt
gtaaatgacaatttgcatccggtttttggcttcagccggcgtttaccgccagagttgtct
ggcagggcagcggctggatgttccgacactgggcattcgttcgacaagctggacgtgctg
catctgctgaaaactgacgtctccgccgatgtcggtgcccacactgaccgatggtcacgg
ttcgccaaagcggttcagtgctttcctgtggaagatgtgcgcagcattctctgcgatcag
gtcgggggcgattgtgcaatttttcttttctttttttcccaccaaccatttatcccgttt
aattgttcgatttccattgttcagaatatatccggtgccgctttgcgtgcttgtttaaaa
ttagctcgacgtcgatttgcactgtcctgcgacggtggtgaccaaaacaattgcggtgcc
gctccggatagggaattcagcagaaacatgccgaaattattcacagccggcaaagaggct
gtgattttcgctttgcaaaatttgattcgtcaatttccagccgacgcagtggctcgtttc
caattttctcaatgggagtatgaattgttgttgtttattcaatttcaatttttctcacga
catgtgaaaattgtatttctcagggtcgacttgacactgccaatcggctaccgtgaaaaa
attgttgttgagattattttattcgtgctttttttcctctgtataggtgtgtgtcgactt
ccacaagtgttcagcttttgcttgactccgtttgctgcatttccattcggctgggtgccg
gatgtgaaacgtatcggcgatctgtgcacgttcagcaacgtgccggttcgatttttggtc
cacgccgacgtgctgaaagatttcatctaccgcgtctgtttgttaggttggctagatgat
tcatctttcttgtatcatttgcatactgttttcttttcgttcaggctggtcgatttggaa
atgcaagcagaccttcaactgccctgcagcttttgcgacgtggaaaagttgtacgaaagt
gccaaactgctgaaccgtgcccagattatcaattccaacatcgcttccggtggttcaatc
gtaacgccgaatttgaggggtgaaacgatcgtcatttgtcattttgttttcaacttgatt
ctattccatacaatatatatgtattttttttgttttatatcagaatcatttgatctggtt
tcatgcatgtattttgtcattgatcttttcgatcattggttcaaggatggtccggatcaa
gtgccactgttgttgctaatttctactctggatgctgcgagatctgcggacgacgagttc
atcaccaacgttattctctttggcattctcaaatgtgccgccaacttgtgcagtagcaac
gcagaatcgttgaaaatgatcttgcaagttgtcgaccacggatgcaaaattccatttcaa
tcgaacaagatgttcatgctttttggtcttttacaatcgttgcgcagtttcccatcggcc
gatgttgcctgctttttgcccaacattggcgaattaattttgcacacttttcaactgatg
tccgaccgccaggcggtgaacaacgttcaagtttgcggattggattatgaggtagcttgt
tgtgcgctcgcttgtcaaatgatggaaaaacttgccgacgaacacggcacggtggattat
ttgaaaactctgctcaaatcgaattattgcgctgaatcgtcttggcaagatggaagaatt
cgatacggagttgtttgcgttcacggtgagacgattcaaagaacttttgccgaacgaaat
tcttgtcaatga
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integrated database retrieval system
