KEGG   Trichinella spiralis: Tsp_02373
Entry
Tsp_02373         CDS       T01609                                 
Name
(RefSeq) putative RNA recognition motif protein
  KO
K12831  splicing factor 3B subunit 4
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_02373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_02373
Spliceosome [BR:tsp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Tsp_02373
 Complex B
    Tsp_02373
 Complex C
   U2 SnRNP specific factors
    Tsp_02373
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 10908172
NCBI-ProteinID: XP_003378254
LinkDB
Position
Unknown
AA seq 432 aa
MAAGPVTDRNQDATIYVGGLDERVSETILWELFVQAGPIVSVHMPKDRISSTHQGYGFVE
FMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDIGANVFIGNLDPEVDEKLLYDTF
SAFGVLLQVPKIMRDPETGNSKGFAFINFASFEASDAAIEAMNGQYLCNRPISASYAFKK
DAKGERHGTAAERLLAAQNPIFPADRPHQLFADAPAIPTFPPPGMPVLPPNITPMTMPPP
VAVGPPALGIRPPAPPLPAFPARPQGGFVAPPPPPPSAVGFNMTVNPSDGSLPPIPPPSS
PMLSEGLVPPPLSNMPPPPPPPPSIPHPLQHGGMPVPPPSNMPRPPLPPPPPGIGRPPMP
PMGIPVPPGHRLPTRPPMPPPVTARPMMPSRPPVPPPASNFAMRPPPPLGPRPPQRMVGH
PGMMPPPPPPQY
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcagctggcccagtaactgatcgaaatcaagatgctactatatacgtgggcggcttg
gatgaacgagtaagcgaaactattttatgggagcttttcgtccaagctggtcctattgta
agcgttcatatgccaaaagataggattagcagcactcatcaaggttatggcttcgtagaa
tttatgggtgaagaagatgctgattatgcaataaaaataatgaatatgattaaactttat
ggtaaaccaatacgagtaaataaagcttctgcacaccaaaaaaatcttgacattggtgca
aatgttttcattggaaacttagatccagaggtggatgaaaaattgctttatgatacattc
agcgcatttggcgtattattacaagttccaaaaattatgcgtgatccagaaactggaaat
tcaaaaggttttgcttttattaatttcgcaagctttgaagctagcgatgcagccatcgaa
gctatgaacggacagtatctttgcaataggcctatcagtgcatcgtatgcttttaaaaag
gacgccaaaggtgaacgtcatggcacagcagcggaacggcttctggcagcacagaatcca
atatttccagccgatcgaccacatcagttgttcgccgatgctcctgctattcccacattt
cctccaccgggtatgccggtgttgccaccaaatatcacaccgatgacaatgcctccgccg
gttgctgtggggcctcctgctttgggaatacgtccaccggctccaccgctaccagctttt
ccagcgcgtccacagggaggcttcgttgcaccacctccgcctccaccttcagcggtcgga
ttcaacatgacggttaatcctagtgatggttcacttccaccgattccacctccatcatcg
ccaatgctcagtgaaggtcttgttcctcctcctctttctaatatgcctccacctcctcca
ccgccaccatcgataccgcatccacttcaacacggtggcatgcctgtgccacctccgtcg
aacatgccgcggccacctctgcctcctccacctcctggcataggacgcccgccgatgcct
ccgatgggaattcccgttcctccgggacaccgacttccgactagaccaccaatgccacca
ccagttactgcaaggccgatgatgccttcacgtccacctgtgccgccacctgcaagtaat
tttgcaatgcgcccacctccaccacttggtccaagaccgccgcaacgtatggttggtcat
ccaggaatgatgcctccaccacctcctccgcaatattga

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