KEGG   Trichinella spiralis: Tsp_02387
Entry
Tsp_02387         CDS       T01609                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tsp  Trichinella spiralis
Pathway
tsp03020  RNA polymerase
tsp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tsp_02387
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tsp_02387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsp03021]
    Tsp_02387
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_02387
Transcription machinery [BR:tsp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Tsp_02387
  RNA polymerase III system
   RNA polymerase III
     Tsp_02387
  RNA polymerase I system
   RNA polymerase I
     Tsp_02387
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tsp_02387
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 10908158
NCBI-ProteinID: XP_003378240
LinkDB
Position
Unknown
AA seq 145 aa
MPSGERESERKGKPAGYSVMAWLIKSYEEDEGGDDEFYEDAVVERQPRLEILESIDTEIE
PDRKAKIRITTPYMTKYERARVLGTRALQISMGAPVLVELEDERDALEIARKELKARRIP
LVVRRYMPDGSYEDWRVDELIITDY
NT seq 438 nt   +upstreamnt  +downstreamnt
atgccatcaggagagcgcgaatcggaaagaaaggggaaacctgccggttattcggtaatg
gcatggctaataaaaagctatgaagaagatgaaggtggggatgatgaattttacgaagat
gcagtggtagaacggcaaccgcgtttggaaattttggaatccattgatacggaaattgaa
cccgaccgaaaagctaagataagaataacaaccccttacatgacgaaatatgaacgtgca
cgtgtgttgggaactcgagccttgcagatttccatgggtgcacccgtacttgttgagctg
gaagatgaaagagatgcgttggaaatagctagaaaagagttgaaagcacgacgtattcca
cttgttgttcgcaggtacatgccggacggaagctatgaagattggcgagtcgatgaatta
attattacagattactga

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