Trichinella spiralis: Tsp_02488
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Entry
Tsp_02488 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02488
Membrane trafficking [BR:
tsp04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
Tsp_02488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
10903098
NCBI-ProteinID:
XP_003378810
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MEKGRVVPMRLFATWEIDRACSSSVPRLCCIVLNRLTILRPFEQELSYLGFKRTLRSNDV
AVLPVNGIVDVDLDISFTLQVKHCSIDFDEKLELYPHFVKKQSNRLIVMLQRRKKYKNRP
MLGYKTLAAGAINLTDILQNAVVRELTLYSDDPNCASKPAGKLYILSLSSQPLDQDDSKA
KDQSGGDLSDDEEEDWTGNEEGGASDSEPIVDDPSVGNLSRLKHSPRFGSQQQQQQMPVR
FALHQKNLKQKFIALLKKFKIPEEESSGVDFGKKPAQQELEALFEELESLTDSGAEQEND
AVSLRSTPKPSLRPYFPSRETLPTLRDVGSDDSKDSVENVFTGNGTTDSHSMFHVNYVVV
VDVGQFASASADAEQKKQISSSLYYQSEISDGRKPSSARSIKSGSESSELRLKPVLHQNS
APLFDSPKLLRSVTASSSSAVLTSAASKQRQAAASASAVNIPSILEQIQCVFPADDESLP
NSSNKNASNPRMIQLCLIGADHFFSYCLEFYTEYFGQKPNDWLNYIRFYPVACQYCVLWR
YLVTTDRTYSSLFGDGFWREVWEKANLSENDVNEVVRRLQLYLSSAKLMLPLTISEAMIH
LKSENASSAFKQIFVPFVVNVRLASAEPLSAAVNSGDLPDLPSSSSGFSSAQVVSNNSSS
LSGQASSVQNMSTNLINARAADVSSAGHSSPPGSPHNEPLVDRLSNLITTSGSSDAKELQ
IEYWAPPNVHSVPGPSSLVGSSGLKTTEGVATKKDSQCFATSTLAKYSLKTTFRSLTISK
SPSDPLVCLIEPFISSPHTLSLQFVKEKRKDKILTSKICFIFCCCVLCSMKKIKRQLFSY
FAINVDVKCIFFSIVLQKLGMKNKDRAEVEQKSQSVDGISRLICSSRQNSRMNLFIDGVE
WSDVKFFQISALWQTHVKYFPVGIFQAESSKELN
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggccgtgtagttccgatgcgtctgtttgcgacgtgggaaattgatcgagcc
tgttcaagctctgttccacggctctgctgtattgtattgaatcgtctgacgattttgcga
ccttttgagcaagagttaagttatttaggtttcaagagaactttacgctccaatgacgtg
gcagtacttccggtcaacggtattgttgatgtggatctggatatttcgtttactcttcaa
gtaaagcattgcagtattgattttgatgaaaaacttgaattgtatccacattttgtgaaa
aagcaaagcaatcgtttgattgtaatgcttcaaagaaggaagaagtataaaaatcgaccg
atgcttggctataaaactcttgctgcgggtgcaataaatttaacagatatacttcaaaat
gctgttgtgcgagagttgacgctttacagtgacgatccaaattgcgcatccaagcctgcc
ggtaaattgtacatattatctctgagtagtcaaccacttgaccaagacgattcgaaagcc
aaagatcaatcagggggcgatttgtctgatgatgaagaggaagattggaccggtaatgaa
gaaggaggtgcatctgattcagagccaatagttgacgatccatctgttggaaatttatca
cgattgaaacattccccaagatttggaagtcaacagcagcaacaacagatgcctgttcga
tttgcattgcatcagaaaaatttgaaacaaaaatttatcgctttgttgaaaaagttcaaa
atacccgaagaagagtcttctggggttgattttggcaaaaaacccgcacagcaagaattg
gaagcgttgtttgaagaattggaaagtttaacagattctggagcggagcaagaaaatgat
gctgttagtttgcgttcaactccgaaaccttcactcagaccttattttccatctcgtgaa
acattaccgacactaagagatgttggtagtgatgatagtaaagattccgttgagaatgtt
ttcactggtaacggtacaaccgattcgcatagtatgttccatgtaaattatgttgtagtg
gtggatgttggtcagtttgcaagtgcgtcagcagatgcggaacagaaaaagcaaatttct
tcttcactttattaccaaagcgaaatttctgacggaagaaagccgtcatcagcaagaagt
atcaaatcaggttcagaaagttcagaattgagattgaagcctgttttgcatcaaaacagc
gctccattatttgacagtccaaaattgcttagatctgtgacagccagttcatcgtccgca
gttttaacttccgctgcttcgaaacaacgtcaagctgcagcatccgcatctgcagtaaac
attccaagcatacttgaacagatacagtgtgtatttcctgccgatgatgaaagtttgccc
aactcctcaaacaaaaatgcttccaatccacgaatgatacagttatgcctgattggtgca
gatcattttttcagttactgtttagaattttatactgaatattttgggcaaaaaccaaac
gattggttaaattatattcgattttaccccgtcgcttgtcagtattgtgttttgtggcgc
tatttagtgactactgatcgaacatattccagtttgtttggagatggattttggcgtgaa
gtatgggaaaaagcaaatttatctgagaatgatgtcaatgaagttgttcgccgattgcag
ttatatttgagctctgctaaattgatgcttcctttgacaatttccgaagcgatgattcat
ttgaaatctgaaaatgcatctagtgcatttaagcaaatttttgtaccgtttgtagtgaac
gttcgcttagcatctgctgagccgttatcagctgctgtaaattcaggtgatttgccagat
ttgccttcatcatcatctggattttcttctgctcaagttgtttccaacaattcatcatca
ctttctggtcaagcttcttccgttcaaaatatgtcgacaaatttaatcaacgcgcgtgca
gcagacgtatcctctgctggccactcatctccaccaggttctccgcacaacgagccactg
gttgatcgtttatcgaatctaatcacaacttcaggttcttctgatgccaaagaattgcaa
atcgaatattgggctcctccgaatgttcactctgttccaggaccttcttctcttgttggt
agttcaggcttgaagacaacagaaggcgttgcaacaaaaaaagattctcagtgctttgcc
actagcacacttgcaaaatactcgttgaaaacgacgttccgttctttgacaatatcgaag
agcccttctgatccgttggtttgcctcattgagccatttattagttcgcctcatacattg
tcactgcagtttgtcaaagaaaaacggaaagacaaaattctgacttcaaaaatttgcttt
atattttgttgttgtgtgttatgttcaatgaagaaaattaagcggcagttattttcatat
tttgcaattaatgtggacgtaaaatgtattttcttttctatagtgcttcaaaaacttgga
atgaaaaataaagatcgagctgaagttgaacaaaagagtcagtcagttgatggaattagt
cgactgatttgtagttctcgacagaattcaagaatgaatcttttcatagacggagtcgaa
tggagcgatgtgaaatttttccagatatcagcactttggcaaacgcacgtcaaatatttt
ccagttggaatttttcaagctgaatcatcgaaagagctgaattga
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