Trichinella spiralis: Tsp_02517
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Entry
Tsp_02517 CDS
T01609
Name
(RefSeq) putative SH3 domain protein
KO
K20705
dynamin-binding protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02517
Membrane trafficking [BR:
tsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
Tsp_02517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
BAR
RhoGEF
Motif
Other DBs
NCBI-GeneID:
10903133
NCBI-ProteinID:
XP_003378842
UniProt:
E5S0Z3
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MICIGKFIRSPTFNVPLTYCITESKSGDLNFRAGEIIILLKTIDANWYSIILLIKCYGES
AEGYQGIFPSSYVFEENLPQVQPGQKLLIALQTFHAQAAGDLSVNAGDIILGIEKVDENW
WRGVSREKCGLLPANFVRELDMHLDNSQFRENDNVPTKRAVVLKSMKAALPEEIDLNEGE
QVVIEEFLDKYWCRGTCQNRRGIFPRSFVKIVEEEEEQSRTSLNEYKFAISDSKKDLPAK
PTMPYAIVKYQFVPQYEGEMAVEAGELLSLIGHVDNEWTLVSAEGRAGIVPTSYLNIIID
CPTVSGTELQSAIAEANANRPAVTGANSHAHWASSSGGLADFNKSTYYKVLFDYNAATVN
HLMVKAGDLITVLKTVGTEWVEAVNQRTLSRGLLPRSYLTAINDFQIQNKQDHMKMSQKR
QLDIELEKCIARNLLSLDFDCKNRKISDCNVDSKLISPSSSICSTSPSPSTSKCATALPS
SLVMSSYMKCDDSFLSPSTKKIPPPRPKTLPVVHQESPHSGEWNGRLANIFNEILSSEKD
YCNELMIIEKAFEKHQTELHMDDFMEKMNMLINLSKSLIGKLENLSTKPTVLGISGIFID
ISRSLESAYTSYFETQTTVVSKINEKVVLEKVMVDIRKSALCCFDVFSAILCPIHRVMKY
PRYLTEMLKIKDEEYDRLEKQFFFQVKKIRDFMQNLQDVCDRTLSTFNIYQSMAQSFLPN
SSDSNNSPSQQFALKYLNTFNQVDPRSAAQKHINALQTDVIAPMAKLLIEAKGLEKLVEK
RRDKLLDYEMADSKLQKSYTKATEHVKMHTNMQRMKKCQSEYEALNRQLLVDLPKFIEKC
LQTFNVTFNLFIKHQSTFACQFGQQLQQMNSESSQPSTDTHHKPISMGNINVPLVETEGN
CQQPIATPNLLLDKPYYKQQQQQQSQNLQNSVNSIYTELQAIFTDTSKRNEWVQFSDNNN
DKSIFAENRESVDELSANKPSGAEKSGSTTTDWREDEQIRTTMLLPSRFAPPPPASPPHP
EGYSKHRLNSTASSNIENEEEDTVDFCIALFDFSASGPDELSVAQDDLLAVHQRKDLQDN
EEWWLVENEFGNVGYVPANYLKLYAAL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcataggtaaattcattaggtcaccgacattcaacgttccacttacatactgt
ataactgaaagcaaatcaggcgacttgaacttccgagctggtgaaatcattattttattg
aaaactattgatgcgaattggtactcaataattttgttaataaagtgttatggcgaaagt
gccgaaggatatcagggtatattcccttcatcatatgtttttgaagagaatcttccacaa
gttcaacctggtcagaaactgcttatcgctctacagacgtttcacgcacaagccgccggt
gatttgtcagtcaacgcaggtgatattattttgggtattgaaaaagtggatgaaaattgg
tggcgaggcgtttcgagggaaaaatgtggtttgttacccgctaattttgtgcgtgagttg
gacatgcatttggacaatagccaatttcgagaaaatgataacgttccaactaaacgggct
gttgtcttgaaatcaatgaaagctgctttgcctgaggagatagatttaaacgaaggtgaa
caagtggtcattgaagaatttttggataaatattggtgtcgtggaacttgtcagaatcgt
cgaggcatatttcctagatcgtttgttaaaattgttgaagaagaagaagaacagtccaga
acgtcgttgaatgaatacaaatttgcaatatcagacagcaaaaaagatttgccggctaaa
ccgacaatgccatatgcaattgtaaaataccaatttgttccacaatatgagggtgaaatg
gcagttgaagcaggcgaactactgtcgttgattggtcacgttgacaatgaatggacattg
gtatcagccgaagggcgtgctggcattgttccaacaagctatttgaatattattatagac
tgtccaacggtctctggtactgaattacaaagtgcaatagctgaagcgaatgctaatcgg
cctgctgttacgggtgcaaattctcatgctcactgggcaagtagcagtggtggtttagct
gatttcaacaaatcgacttattataaagttctctttgattacaatgctgcaactgttaat
catttgatggtaaaggctggtgacttgattactgttttaaaaacagtaggaactgagtgg
gttgaagcagtaaatcaaagaactctttcgaggggactcttacctcgcagctatctgaca
gctattaatgatttccaaattcaaaacaagcaagaccatatgaaaatgtctcaaaaaagg
cagttggatattgaattggaaaaatgtattgctcgtaatttattatcacttgattttgac
tgcaaaaatagaaaaatcagtgattgcaatgttgattcgaagctgatctcaccatcttca
tccatctgcagcacgtctccatctccgtcgacgtctaaatgtgctacagcactgccttca
tcattggtgatgagttcgtatatgaaatgcgatgacagttttctcagtccatctactaag
aagattcctcctccacgaccgaaaactcttcccgttgttcatcaagaaagtcctcattcc
ggtgaatggaatggtcgattggcaaatattttcaatgaaatactatcatcggaaaaagac
tactgtaatgaattgatgattattgaaaaagcatttgaaaagcaccaaacggagttacat
atggatgatttcatggaaaaaatgaacatgcttattaatttatcaaaatcattaattgga
aaattggaaaatttgtcaacgaaacctaccgtacttggtattagcgggatatttatcgat
atatcaagatcgttggagtcggcttatactagctattttgaaacccaaacaacagttgtt
tcgaaaattaatgaaaaagttgtattggaaaaggtgatggttgatatccgcaaatcagct
ttatgttgttttgacgtattttcggcgattctttgtccaatacatcgagttatgaaatat
cctcgatatttaacggaaatgctcaagatcaaagatgaagaatacgaccgtctggagaag
cagtttttctttcaagtgaagaagattcgtgatttcatgcaaaatttgcaagacgtctgt
gataggactttgtccactttcaacatctatcaatctatggcacagagttttcttcccaat
agcagtgattcgaataattcaccctcacagcagttcgctttgaaatatttgaacacgttc
aatcaagtggatcccagatctgccgcgcaaaaacatatcaatgcattgcaaacggacgtc
attgcaccgatggcgaaattgttgatcgaggcgaagggtttggaaaaattggtggaaaaa
cgtcgcgacaaactgctcgattatgaaatggctgattccaaactgcagaaaagttacacc
aaagctactgaacacgttaaaatgcacacgaatatgcaacgaatgaaaaaatgccaatca
gaatatgaagcactgaatagacagctgttggtcgatttgccgaaatttatcgaaaaatgc
ttacaaacttttaatgtaacattcaacttgtttattaagcatcagtcgacatttgcatgt
caatttggtcaacagttgcaacagatgaattcggaaagcagtcaaccgtctacagatacc
catcacaagccgatcagtatgggaaatattaatgttccccttgtagaaactgaaggaaac
tgtcaacaaccgatagcaaccccgaatttgttgttagataagccttattataagcaacaa
caacaacaacagtcgcagaatttgcaaaattcagtgaactcgatctatactgaactgcaa
gccatatttacggatacttcgaaaagaaatgagtgggttcaattttccgacaacaataat
gataaaagcatattcgctgaaaatagagaatcagttgatgagctcagtgcaaacaagccg
tcaggggcagaaaagagtggatcaacgacgactgattggcgtgaagatgaacaaatacga
accacgatgctgttgccatcgagattcgctccgccgcctccagcttctcctccacatcct
gagggctattcgaagcaccgattaaatagcactgcttcttcgaatatagaaaacgaagaa
gaagatacggtcgatttttgcattgctttgtttgatttcagcgcttctggcccagacgaa
ttgtccgttgcgcaggacgacctgttagctgttcaccaaaggaaagatctgcaagacaac
gaagaatggtggcttgtcgagaatgaatttggaaatgttggttatgtgccggctaattat
ttgaagctttatgccgcactttaa
DBGET
integrated database retrieval system
