Trichinella spiralis: Tsp_02540
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Entry
Tsp_02540 CDS
T01609
Name
(RefSeq) DNA repair and recombination protein RadA
KO
K04482
DNA repair protein RAD51
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_02540
03460 Fanconi anemia pathway
Tsp_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02540
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_02540
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_02540
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
Tsp_02540
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
Tsp_02540
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
Tsp_02540
RecA family proteins
Tsp_02540
FA (Fanconi anemia) pathway
Other FA pathway factors
Tsp_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
HHH_5
AAA_22
Motif
Other DBs
NCBI-GeneID:
10903156
NCBI-ProteinID:
XP_003378865
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSAQRERRQKEKTPKAKEKEATVDKDINESTNVIMPQEEMEENFGPQPISRLEQFGIPNV
DIKKLEEAGFYTIESVAFTPKKVLIDIKGISEAKADKILSEASKLVPMGFTTATDFHQKR
SEIIQITTGSKELDKLLQGGIETGSITEVFGEFRTGKTQLCHTLAVTCQLPVDMGGGEGK
CLYIDTEGTFRPERLLSVADRFQLSGPDVLDNVAYARAYNTDHQSQLLIQASAMMSESRY
ALLIVDSATALYRTDYSGRGELSARQMHLGRFLRYLLRLADEFGVAVLITNQVVAQVDGG
TAMFQADPKKPIGGNIMAHASTTRLYLRKGRGESRICKIYDSPCLPESEAVFAILSSGIG
DAKE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccagagagaaagacgtcagaaagagaaaacaccaaaagcgaaagaaaaagaa
gcgactgtggacaaagacattaatgaatcgacaaatgttattatgcctcaggaggaaatg
gaagaaaattttggaccccaacccatttccagacttgaacaatttggtattcctaatgtt
gatatcaagaagttggaagaagcgggcttttacaccatcgaatcagtggcgtttactcca
aagaaagtgttaatcgatataaaagggatcagcgaagcgaaagctgataaaatattgtca
gaagcgtcaaaattggtaccaatgggttttaccacggctaccgattttcatcagaaacgt
tcggagataattcagattaccactggtagtaaagagctagacaaattacttcaaggtggt
atcgagactggatcaataactgaagtttttggtgaatttcgaactggaaaaacgcaactc
tgtcacacgttggcagttacttgtcagctccctgtcgatatgggtggaggtgaaggaaaa
tgtctatacatcgataccgaaggaaccttcagaccagaacgtcttctatctgttgctgac
agatttcaactctctggtccggatgtgctggataacgtagcttatgctagagcttacaac
actgatcaccaaagtcagctgttgatccaagcatcagcgatgatgtctgaatcacgctat
gcattattgattgttgacagtgctacagcgttgtatcggaccgattattctggacgtggg
gaactttcggctcgtcagatgcatctgggtcgatttttgcgttacctactcagattagcg
gacgaatttggggttgccgttcttattacgaatcaagtcgttgcccaagtggacggtggt
acagctatgtttcaagctgatccgaaaaagccaattggaggtaacattatggcacatgca
tcaacaaccagattatacttacgcaaaggccgaggggagtcacgcatatgcaagatttac
gattcaccctgtttgccagaatctgaagctgtattcgcgatcttgtcatccggcattggc
gatgctaaagaatga
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