KEGG   Trichinella spiralis: Tsp_02638
Entry
Tsp_02638         CDS       T01609                                 
Name
(RefSeq) putative U3 small nucleolar RNA-associated protein 15-like protein
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
tsp  Trichinella spiralis
Pathway
tsp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Tsp_02638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsp03009]
    Tsp_02638
Ribosome biogenesis [BR:tsp03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Tsp_02638
SSDB
Motif
Pfam: UTP15_C WD40 Beta-prop_EML_2 WD40_Prp19 WDR55 WD40_CDC20-Fz LSM Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st EIF3I WD40_WDHD1_1st Utp12 WD40_MABP1-WDR62_2nd Beta-prop_NWD2_C Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 10899093
NCBI-ProteinID: XP_003378964
LinkDB
Position
Unknown
AA seq 381 aa
MSTDSLICTGSYDHTVCLWDNRQQNPVMQLEHSFPIESVALHINDSMLLTAGGTVVTVWD
LVAGKVLAKLSQHHKTITCVRFCTSYKRILSGSLDSNVHSMEYPSPILSFDIKSDDRYLV
VGMNSGLVSFKERKAKAKTVSKKSRKLQMRKFDVVVPRDERQWLPKHDFMLKTFEHRAAL
DYVIKPSQSNKKPEVAVSIFLELIRRGALIKALRKRPEVELMPILKFINKFLNNVRFTEI
LLTVVEKLLDIYGPAMLELSENVRHEFKKMKHFMNAEAQQLKKIACATGTLSVVLALARE
KPGESKMEIDITGNLHSVDQYLNLKLNDVSISDPEKYPHLVSVKNCFIRGSVVRYVHLPA
DEVDTQLLQDATRKEHMLSRK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcaactgatagtctcatctgtacaggatcttatgaccacacagtatgcttatgggat
aaccggcagcagaatcctgttatgcaacttgaacattcatttcctattgaaagtgttgct
cttcatatcaatgacagtatgcttcttacagctggtggtacagttgtcaccgtttgggat
cttgtagctgggaaagttttagccaagctcagtcaacatcataaaacaattacttgcgtt
cgtttttgtacaagttacaaaagaattttgtcaggctcattggacagcaatgtacacagc
atggaataccctagtcctattctatcatttgatattaagagtgatgaccgttatctcgtt
gttggcatgaacagtggacttgtttcttttaaagaacgtaaagcaaaggcaaaaactgtt
tcaaagaaatctcgaaaattgcaaatgagaaaatttgacgtcgtcgtaccacgggacgaa
agacagtggttaccgaaacatgattttatgttgaaaacatttgaacatcgagctgcttta
gactatgttataaaaccgtcccaaagcaacaaaaaacccgaggtggctgtgtctattttc
ttggaattgataaggcgtggagcgttgattaaagcattgagaaaacgtccagaagtggaa
ttaatgcctatacttaaatttattaacaaatttttgaacaacgtcagatttacagaaatt
ctgttaactgttgttgaaaaattattagatatttacgggcctgcaatgttagaactaagt
gaaaatgttcggcacgagtttaaaaaaatgaaacattttatgaatgcagaagcacagcag
ttgaaaaaaattgcttgcgcaactggcacgttgagtgtggttttagctctggccagggaa
aagcctggtgaaagcaaaatggaaatcgacattactggcaatttgcattctgttgatcag
tacttgaatctgaaattaaatgacgtttctatttctgatccagaaaagtatccacatttg
gtctcagtgaagaactgttttataagaggatccgtcgtgcgttacgttcatttgccagcg
gatgaagttgatactcaacttttgcaagatgccacgcgcaaagagcatatgctatctaga
aaataa

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