Trichinella spiralis: Tsp_02717
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Entry
Tsp_02717 CDS
T01609
Name
(RefSeq) putative WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_02717
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_02717
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_02717
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Tsp_02717
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_02717
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Tsp_02717
DSBR (double strand breaks repair)
Other DSBR factors
Others
Tsp_02717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_EIPR1
Med18
Motif
Other DBs
NCBI-GeneID:
10899337
NCBI-ProteinID:
XP_003379046
UniProt:
E5S1J5
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MKYCVTCTFVHNCKEKFSDVCMFSEDTSLKMDYEESRKEIINQRKRFLENLGIIEEIHSI
EPPKKVKPVRQKRKVADVEVVQLRRSRRLEMQNGISYDNDEMQNLQQSFEASANKLTSNF
EEYKRPEGALRMLDCCIPLQSSEKAEDVANLSTLFGKLKMVEDTFNVSDWTTSDRILEQL
SNLSYRERLKLVRSRIYSLCIHPSNCRILVTAGDKNGRIGFADLTDHIADVSEAPTWQFA
PHSAPVNCIRFAPDPTKLFSCSYDGSARYLDLEAGVFEEVRWQFVYLSSYSAKYNNRTTA
QFRYLWTTRPAKQETVRFECWTTENRQYSPSGEELFRHSINTGVHFFLFTNFKCPSVNVG
KYRLATIWDLRKLKNPVSELKHKGGVNSAYFSPLTGNKVLTAAASNTIEVWDTKKMTKTK
KLKSIPHNNFVGRWVTNFRPVWHPTVESVCFSGSTNSIRHIEVFDENLRAVKLLGVTTMC
SIIDCHPGRAILCGGNSSGYVSVFI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactgcgttacttgtacctttgtacataactgtaaggaaaaattcagtgatgtt
tgcatgttttcagaagacacgtcgttgaaaatggattacgaagagagtcgtaaagaaatt
atcaatcagcggaaacggtttttggaaaatttgggaataatcgaggaaatccactccatt
gaacctccgaaaaaagtgaaaccagtccgacagaaaaggaaagttgcagacgtagaagtg
gtgcagcttaggcgaagcagacgtttagagatgcaaaatggcatatcttatgacaatgat
gaaatgcaaaatttacaacagtcgtttgaagcaagtgcgaacaaattaacgtcgaatttc
gaagaatacaaaagacctgaaggtgcgttgagaatgttggattgttgcattccattgcaa
tccagtgaaaaagcggaagatgttgctaatctgtccacactgtttggcaaactgaaaatg
gttgaagatacgttcaacgtatctgattggacaacgtcggacagaattttggaacaatta
tccaatctcagttatcgagaacgactgaaattggttcgcagtcgaatttactctctctgc
attcatccttccaattgtagaatacttgtcacagcaggtgacaaaaatggacgtattgga
ttcgctgacttgactgatcacatagctgacgtttctgaagcaccaacttggcagttcgct
ccacattctgcaccagtgaattgtattcgcttcgcacctgatccaacgaaattattctct
tgcagctatgacggaagtgcgcgatatcttgatttggaagcaggcgtttttgaagaagta
cgatggcaatttgtctatttatctagctattctgcaaaatataataatcgaacaacggcg
caattcagatatttgtggacgacgaggcctgcaaagcaagaaaccgtgcgtttcgaatgc
tggacgactgagaaccgtcagtattcaccctctggagaagaactatttcgtcatagcatc
aatactggggtacatttttttttatttaccaattttaaatgtccatcagtgaacgtggga
aaatatagactggcaacgatttgggatttgcgaaaattgaaaaatccagtatcagaactg
aagcacaaaggtggtgtaaatagtgcttatttttcgccgcttactggcaacaaagtgctc
acagctgcagcttcaaataccattgaagtctgggatacgaagaagatgacgaaaacgaaa
aaattgaaaagcataccacacaacaatttcgtcggtcgatgggtaacgaattttcgcccg
gtttggcatccgactgtcgagtcggtatgcttctcaggaagcactaattccattcgacat
atagaagtgttcgacgaaaacttgcgagctgtgaaactgttgggcgtgacaacgatgtgc
tcgatcattgactgtcatccaggacgagccattttgtgtggaggaaattccagtggctac
gtatcagtatttatttaa
DBGET
integrated database retrieval system
