Trichinella spiralis: Tsp_02870
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Entry
Tsp_02870 CDS
T01609
Name
(RefSeq) putative degenerin mec-4
KO
K03440
acid-sensing ion channel, other
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsp04040
]
Tsp_02870
Ion channels [BR:
tsp04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
Tsp_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASC
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
10899817
NCBI-ProteinID:
XP_003379201
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSNRVTFQRDTTTKRRFKNLLLNFSDKTTAHGVPRIGMATTKREGAFWTFVCVTSLTVFL
FQLSLLIARFLRFETTTQVELKFETSLFPVVTLCNLNPYRNSLLKQVDQMKLMFDAFDNK
PLSTPKTSTLLARKRRASSADEKQYRYTPLYARCSCPNEESDCVPFTSAPLEDGEEICIC
YFDHVTKSPWPCYSEKQWRSEWCSRCSPNGNCLQILKKRQLSLYEDVKHDFELLMDPVYG
NCYMFNSNSTINRTTSRAGPIYGLSLVIYVDADDYLPTTKASGVRLLVHSQEEYPFPDTN
GYNAPTGLLSSFGIRMKKIERLPQPYGDCIKEGKTKDYIYKDQIYSLEGCYRSCFQMEMI
KSCGCGDPRFPVPEGRRHCRVKERKARSQYVYDMSFSAAKWPTPSIEWVNLMADFGGQLG
LWMGVSVITIIEVLVLIYEVIKICCTRRKKPTMNKHHRRSIYDDSTVEMTIKIHPPNQNN
PKDSIATAHSENDDECSQNSYAMENQYAC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgagttacttttcaaagagatacaaccaccaagagacggttcaaaaatctg
ctgctaaacttcagcgacaaaacgaccgcacatggcgtgcccagaattggaatggcaaca
acaaagcgcgaaggagcattctggactttcgtctgtgtcacatcgctgacagtgttccta
ttccagctgagcttgttgattgcacgatttcttcgattcgaaaccacgacccaagtagag
ctcaaattcgaaaccagccttttcccggtcgtaacattgtgcaatttaaatccttacaga
aacagcctactgaaacaagtggaccaaatgaaacttatgtttgacgcgtttgacaataag
ccattgtcaacgcccaaaacttccactcttctagcaaggaaacgtcgagcatcttctgct
gatgagaaacagtaccgttacacgccactttacgcgcgctgctcttgtccaaatgaagaa
tccgactgcgttccgttcacttccgctccgcttgaagatggcgaagaaatttgcatatgc
tactttgaccatgtgacaaagtcaccatggccatgctattctgaaaagcagtggcgttcc
gaatggtgctccagatgcagcccaaatggaaactgcttgcaaattttgaaaaaacgacaa
ctgtcattatacgaagatgtaaaacatgatttcgaattgctcatggatcctgtatatggc
aactgctatatgttcaattcgaacagcactatcaacagaaccacaagcagagctggacca
atttatggtctgtcattggtaatttacgttgatgcagacgattatctgccaacaacaaaa
gcttctggtgtacggctgcttgttcattcacaagaagagtatccatttccagatacaaac
ggctacaatgcaccaacgggattgctttcttcgttcggaattcggatgaaaaagattgag
cgattaccacaaccgtatggagattgcattaaagaaggcaaaacaaaagattacatctac
aaagaccaaatatattccctcgaaggctgttatagaagctgttttcaaatggagatgatc
aagagctgtggatgcggcgatccaagattcccagttccagaaggaagaagacactgccga
gtgaaagaacgcaaagctcgtagtcaatacgtgtatgacatgtcgttttcggctgcaaaa
tggccaactccttctattgaatgggtgaatctgatggccgatttcggtggtcaattagga
ctttggatgggtgtcagtgtgattacaatcatcgaagtgcttgttttaatttatgaggtg
ataaaaatatgttgcaccagaagaaaaaagcctacaatgaataagcatcatcgacgctcg
atttacgacgattccacggtagaaatgacaataaaaattcatccacctaatcagaacaat
ccgaaagattcgattgccactgcacattccgagaacgacgacgaatgctcgcaaaattcc
tatgcgatggaaaatcagtatgcatgttga
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