Trichinella spiralis: Tsp_02976
Help
Entry
Tsp_02976 CDS
T01609
Name
(RefSeq) putative cadherin EGF LAG seven-pass G-type receptor 3
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
10900089
NCBI-ProteinID:
XP_003379311
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MLAGVLCCSLLFQASLFSSAAVHPQSTLLRKVLYVNSTCIGAGGPVFPSFDRWLLKRFNV
PVTANSICLGEWFITTVDGELSTGEEEGSVSAFSVQLKLRRRRRASRHRRAQSNDGDQWS
GFSKSRYEVSVLEEQEPPISLLNFAQLSSAANVETVSSCSVTGAGNVQSQNLFTVEKETG
RLITTGRLDREQADKHTLRITCYEMTSNGRRSTTAIVLVNVLDLNDHEPVFERSNYAASI
SESVEPGTTVLHVHAQDEDAGRNGRIQYSVQRTNPETPLPFSLGSDDGVLRVEKPLDRET
CPFYRFEVLACDQPLTITERLCAKALVEVTVDDENDNAPEFEQSSYVVEIDENLDPNDKP
VIANVMARDRDFGHNGEVKYSIVSGNAEGRFSIDYNTGEVRLVDRVDYRQTDHYELVIRA
QDSATFSLSNTTLLEIRIRDVNDHAPQFYAPVFQESVREDVPVGYRLLRLAAYDLDSGHN
SEIRFRFTGPEANNCPLELDSVTGWVTVAKPLDHELEPTIELQVEAVDLGNPPLSSNAKL
IVNVLDVDDNVPVFPEKQLNVSVPETARRGSLLLRIAAHDPDNNSGRLQYSIISGNDDRA
FILLNEENNYCSLAVDQPLSYTSKPIHVLSIKVTDSAGHWDTMTVRVQVEDVNSAPTFAE
HSSTIHVRESEPVGSTVTVVRAIDPDDGENARLQYQLEGGEPVFAIEPSTGVLFVNGTLD
RESQSRFKLKVIATDHGQPPLSGSMDLEVVLDDVNDNAPVFSRTRYVTNVSEDAAVGVSL
LHLTATDSDYGINSRITYHFSDEDPENDAFQIDPSSGVVRVARPLDRERRAVYEITVLAK
DKGEPPLIGRTTLVINVDDVNDNAPKFDREAYQFEVYENVPIGTIVGHVLAVDPDVGEHA
LVSYKILGGDDAAAFEIHSPMSNSEGMDLVTRIELDFESDRRTYQFHIQASSGQLSSMAE
VLVRVLDLNDHEPVFNDFYLVVYNHESDPWNKDLSNRPIGRVPAFDLDLNDTLYYKIAAG
NEADLIQLDSNTGELRLSAALNTNRRIRLLLLIQVSVKQQQLTVIQNCNNLQ
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgctagctggcgttctgtgctgctctctgctcttccaagctagcctgttcagctcagct
gcggtccacccccagtcgactctgctgcgcaaagtattatacgtgaacagcacatgcatc
ggtgccggagggccggtgttcccttcgttcgaccgttggcttttgaaacggttcaacgtt
ccagtaacagcaaattctatctgtttgggcgagtggttcatcaccactgtcgacggtgaa
ctatccacaggtgaagaggaaggaagtgtatcagcgttcagtgtgcagctgaagctgcga
cgtcgacgtcgcgcttcacggcatcggcgagcacagtccaacgacggtgaccaatggtcg
gggttttcgaaatctcgttacgaagtaagcgtgctcgaagagcaagagccgccaatctcc
ttgctcaacttcgctcagctgagctcagctgccaacgttgaaacagtgtcaagctgcagt
gtgacaggtgctggaaatgttcagagccagaatttgttcactgtggaaaaggagactggg
cggctgataacaactggcaggcttgatcgagaacaagccgacaaacacacgcttcgcatc
acttgctatgaaatgacatcgaacggtcgtcgttcgaccactgcaattgtgctggtgaac
gtgctcgacctgaatgaccatgaaccggtgttcgaaagatctaattacgccgcttcgata
tctgaatcagtggaaccaggcaccacagttctgcatgtacacgcgcaggatgaggatgct
ggccggaatggtcgaatccaatacagcgtacaacgaacaaatcctgaaactccgcttcca
ttcagtcttggctcagacgacggtgtgctacgggttgagaagccgctcgatcgtgaaact
tgtccattttacagatttgaagtgcttgcttgtgaccagccgctgaccatcactgaacgt
ctttgtgcaaaagcgttggtcgaagtgaccgttgacgatgaaaacgacaacgcacctgag
tttgaacagagcagctatgtggttgaaattgatgaaaatttggatccaaacgacaagccg
gtcattgcaaacgtcatggcgagagaccgtgattttggccataacggagaagtgaaatat
tccatcgtcagcggcaacgcagaaggtcgcttttccatagattacaacacaggtgaggta
cggctcgtcgacagagtcgactatcggcagactgatcattatgagctggtgataagggcc
caagattcagccacattttctttgtcgaatacaacgctgttggagattcgaatacgtgat
gtgaacgaccatgcgcctcagttttatgccccagttttccaagaatcagtgcgtgaagac
gtgccggtcggataccgcctgttaagactggccgcatatgatctggacagcggtcacaat
tcagaaatcagattccgattcaccggaccagaggctaacaactgtcctctggaattggac
tcggtaaccggctgggtaacggttgccaagccgttagaccatgaactggaaccgactata
gaactacaggtggaggcggtagatttaggcaacccgccgttgtcttccaatgccaagtta
atagtgaacgttttggacgtcgacgacaatgtgcccgtgttcccggaaaagcagcttaac
gtttccgtaccggaaactgcacgacgaggcagcctgctgttacgaatcgcggctcacgat
cctgacaacaacagtggtcgtttgcaatacagcataatttctggcaacgatgatcgagca
tttatactgctgaacgaggagaacaactattgctctctggcggttgatcagccgttgagc
tacacatccaagccgatccatgtactcagtatcaaagtgacggacagtgccggccattgg
gacaccatgaccgttcgagtgcaggttgaagacgtgaactcagcaccaacatttgctgaa
cattctagcacgattcacgtccgtgaatctgagcctgtgggttccactgtgaccgtcgtc
cgagcaatagatccagacgacggagaaaatgcccggctgcaatatcagctcgaaggaggt
gaaccggtgttcgcgatcgagccgtccaccggcgtgctgttcgtcaatggcacgttggat
cgagaaagtcaaagtcgattcaagctcaaagtgatcgccactgaccatggtcagccgccg
ttgagcggttcgatggatttggaagtcgtcttggacgatgtgaacgacaacgcgccagta
ttttctagaactcgttacgtgaccaacgtttctgaagacgcggcggttggagtgagtctg
cttcatctgaccgctacagattctgattacggaattaacagtcgaataacgtatcacttt
tctgatgaagatccagaaaatgacgcgtttcaaattgatcccagttcaggagtggttcgc
gttgccagacctttggatcgtgagcgtcgagctgtgtacgagataaccgtacttgccaaa
gataaaggcgaaccgccgttgattggacgcacaacactggtgatcaatgtggacgatgtc
aacgacaatgccccgaaattcgaccgtgaagcgtatcagttcgaagtgtacgaaaacgtc
ccaatcggaaccatcgttggacacgtgctggccgttgatccagacgttggtgaacatgcg
ctagtcagttataaaattctgggtggagacgatgcggccgcttttgaaatacactcccca
atgtccaacagtgaaggcatggatttagtgactcgcattgaattggattttgaaagtgac
cgtcgtacttatcagtttcacattcaagctagctctggccagctcagctcaatggccgaa
gtactggttcgggtacttgatttaaatgatcacgaaccagtgttcaacgatttctatcta
gtggtgtacaaccatgaatctgatccttggaataaagatctatctaacagacctattggg
cgggtgcctgctttcgatttggatctcaacgatacactgtattacaagattgctgccgga
aatgaagcagacttaattcagctggatagcaacactggtgaactgcgtctcagtgcagcg
ttgaacacaaatcgccgcattcgacttttacttttaattcaagtttcagtaaagcaacaa
caattaactgttattcagaactgcaataatctgcaatga
DBGET
integrated database retrieval system
