Trichinella spiralis: Tsp_03070
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Entry
Tsp_03070 CDS
T01609
Name
(RefSeq) putative WAP-type 'four-disulfide core'
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_03070
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
Tsp_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH_Egal
WAP
Motif
Other DBs
NCBI-GeneID:
10900348
NCBI-ProteinID:
XP_003379408
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MQAEIFLILICITQVVHYLFHIYNPNCNIFYFIAIPGQDKPGFCPPFYGQPSLTSLDRCR
GDVQCPGDRKCCQTLNGRVCLKPQTTAVHLCPDNSVPLKECVRNQCPVNYQCIKGSCCRS
NIKQEKVGTCPPNPSGKVNTAGNQCEEDNDCELTRKCCPTFSGTRCLLPLTSYGIYLCYL
FHVFQNQILEDVKRHYITENATNIINNTYEIISLQAFVRISKDRTKLARTVTLVLQDFSA
VEDFVAKMSDPLTTNCQHVQRTNQTILNLDDFASAIMTAKDRRNAANTNHSLDAHQPATI
FQIANMSSTNTADEDSAKHMALMFFLDHLMQKNGRRSIHDLSCQFGARGFTADMRQAVGG
SKESLADFLAQFPSLFSIDDGQVTLKGYGDDPANALASQPACLNKERDSVAEAIRFFTEK
LRKFGPELPVKSLLGHRSQASPDVRLVSGCHFRDFSLFLSQHKEAFVVTGDRVCLKEAWD
EMEKGVDQSEAEQLNGQQVVDMVVQFLVSEVEAHETAVPLEVLYRKFCNHFPLAVRKRVN
AANPKELMQFLKLLRHLFFIRSNKVSMNRRRTTQAGGVDYSSGLDDDQETDVSSNSSTSK
PTNAPTRSTAQKDITIARSLQSAVQAVHDIVCACEDIASCSSPDLCKVLAVHFKSVIVGQ
HEFLTLITICTPNGRIFVFDVEYTASILLECGLKDILESDEYLKVCLVYYYYYYKSNLFI
RYPLQIVHGSKRAARLLWQHYKIRLWEVFDTQVERIAQLLIENDESGVSLFLLRRGSVAA
LVHYLNAKPLFDHEPLRAQIREQTSAAKVDEVCHIVEELFDLFPNAYRSLRSRLPSNKLN
LFTSLCQDAVSNLDIPPHGLSDQLSPQPQMENGHHGTTTLLQESQEPSGSHSPVMQQLEE
NNTISTKNMNNTSGQLVCTCKAIKRISVACQTASTGDITSTTFFTEEP
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagagatctttctaattctaatttgcattacacaagtagttcattatttattt
catatttataaccctaattgtaatatattttatttcattgctattccaggacaagataaa
ccgggcttctgtccaccgttctatggacaaccaagtttgacgtctctagaccgctgtcgc
ggagatgtacaatgtccaggggacagaaaatgttgccaaacgttaaatgggcgtgtctgt
ctgaaacctcagactactgctgtccatctctgtccggataacagtgtaccgttgaaagag
tgtgtgagaaaccaatgtcctgtaaactaccagtgcatcaaaggtagctgctgtcgatct
aacattaaacaagaaaaagtcggcacatgtccaccgaacccatccggtaaagtgaacaca
gctggcaaccagtgtgaagaagacaacgactgtgaattgacaaggaaatgctgtcccacc
ttttccggaacccgctgcctattaccactcacctcatatggtatttacctctgctactta
tttcatgtttttcaaaatcagatacttgaagatgttaaacgacattatataactgagaat
gcaacaaatataataaataacacttacgaaatcatttcattgcaggcatttgtccggata
agcaaagatcgtaccaaacttgcaagaacagtgactcttgtgctgcaggatttttctgca
gtcgaggattttgttgcaaagatgtcggatccgctgacaaccaattgccaacatgtccaa
cgtacaaaccaaacaattttgaatctggacgattttgcctcagcgataatgactgcaaaa
gatcgcagaaatgctgcaaatacgaatcacagtctcgatgcacatcagccagcgacaatt
ttccagatcgccaacatgagcagcacgaatacagcggacgaagattcagcaaagcacatg
gcgctgatgttctttctcgatcatctgatgcagaagaacggtcgtcgctccatacacgat
ctgagctgtcagtttggggcacgcggttttacggctgacatgaggcaggcagttggcggc
agcaaggaaagtctagcggattttctggctcaattcccatctctgttttccatagacgac
ggtcaggtgacactgaaaggttacggcgatgatccggccaacgcactggcatcccaaccg
gcttgcttgaacaaagaacgcgattcggttgccgaagcgatacgcttcttcacagaaaag
ctgcgcaaattcggacccgagcttccggtcaagagcctgcttggacaccggtcgcaggca
tcgccggatgtccgactggtatccggttgtcattttcgtgacttcagcctgtttctcagc
cagcacaaggaggctttcgtcgtcactggcgatcgggtgtgcctgaaagaagcctgggac
gagatggagaagggtgtggatcagtccgaagctgaacagctgaacgggcagcaggttgtg
gatatggttgtgcagtttctcgtttcagaggtcgaggcgcacgagacggcagtgccactg
gaagttctgtaccggaaattttgcaatcactttccactggcagtgaggaaaagagtcaac
gcagccaatccgaaagagttgatgcaatttttgaaattgttgcgtcacttgttcttcatt
cgctccaacaaggtgtccatgaatcgtcgacgcaccacccaggcaggcggcgttgactac
agttctggcttggacgacgatcaggagactgatgtcagctcgaattcgtccacatccaag
ccgaccaacgccccaacacgttcgactgctcagaaagatatcaccattgccaggtccctg
cagtctgccgtgcaggcggtacatgacattgtctgcgcatgcgaagatatcgcaagctgc
tcatcgccggatttgtgcaaagtactggctgtgcatttcaaatcggtcattgttggtcag
cacgaatttctcactctgatcaccatctgcacacccaacggtcgaatttttgtcttcgat
gtcgaatacacggccagcatcctgctcgaatgtggcctcaaagatattcttgaatcggat
gaatatcttaaagtttgtctagtttattattattactattataaaagtaacttatttatt
cggtatccgttgcagatcgtccacggttcaaaacgagccgcccgtttactgtggcagcat
tacaaaattcgtctctgggaagttttcgatacacaggtagagagaattgcgcagctgttg
attgaaaatgacgaaagtggcgtgtcgctgtttctgctcagacgaggttccgttgccgca
ctggtccattatttgaatgcgaagccacttttcgaccacgaacctctaagagcgcaaatc
agagagcagaccagtgcggccaaagtggacgaagtatgccacattgtcgaggagctgttc
gacctgtttccaaacgcttatcgatcgttgagaagtcgcctgccgtcgaacaagttgaac
ttgttcacatctttgtgccaggatgcagttagcaaccttgacatacctccacacggcctt
tctgatcaactgtcgccacaaccgcaaatggaaaacggacatcacggtactactacgttg
ttacaagaatcccaagaaccaagcggatctcactcgccagtgatgcaacagttggaagag
aataatacaatttcgactaaaaatatgaacaacaccagtggtcagttggtttgtacatgc
aaggctatcaagcgaatcagtgtcgcttgccaaactgcatctacaggtgacatcacatct
acgacatttttcactgaagaaccatga
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