Trichinella spiralis: Tsp_03075
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Entry
Tsp_03075 CDS
T01609
Name
(RefSeq) CRM1 C family protein
KO
K14290
exportin-1
Organism
tsp
Trichinella spiralis
Pathway
tsp03008
Ribosome biogenesis in eukaryotes
tsp03013
Nucleocytoplasmic transport
tsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_03075
03008 Ribosome biogenesis in eukaryotes
Tsp_03075
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tsp_03075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_03075
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_03075
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_03075
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03075
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tsp_03075
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Tsp_03075
Pre-60S particles
Tsp_03075
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Tsp_03075
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Tsp_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Laa1_Sip1_HTR5
DUF4504
Motif
Other DBs
NCBI-GeneID:
10900353
NCBI-ProteinID:
XP_003379413
UniProt:
E5S2L2
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MAEEILVKASKLLEFNTPVIDVSLLDAVINLMYCGTGEIQRKAQEILTMLKENNEAWTRV
DAVLEYSRSLQSKYFALQILENLVNTRWRRLPRDQCDGIKKYLVDRIISISSNPSLSEDE
KVFLNKMNMVLVQIVKREWPKHWPTFISDIVGSSRSNESLCRNNMVILKLLSEEVFDFSS
GQMTQTKANHMKQQFCSEFRAIFELCQHILESSTNVMLVEATLNTLLGFLVWIPVGYIFE
TNLIESLTAKFLSILPFRNVTLMCLTEIAGVTFPKNAPPAYSSTICRLFSRTMQQLNTVR
LNMLPPHTNIPEAYAMGNDNDQKCISNLALFLSTILRQHCKIIEAECKEKIGELLGTPFD
LAMNYLLAISEVDDMEVFKICLDYWNWLVAELYREPPLTNPLLTMNLAIQLIRKDSLCTR
YHYVPYLSRLRSVIISRMAKPEEVLVVENDEGEVVRETIMDTDAISLYRTMRETLVYLTH
LDCADTERIMTEKLQNQTNGSEWSWKNLNCLCWAIGSISGALMEEDEKRFLVMVIRDLLG
LCEQKRGKENKAVIASNIMYVVGQYPRFLRAHWKFLKTVINKLFEFMHETHEGVQDMACD
TFIKIANKCRRHFVIIQAGEKEPFIEEILASLNTIICDLSPAQVHVFYEAVGYTISAQPV
QIVRDNLIERLMSLPNHTWDDVILKATTNVEILKDIEVVKNLVNILKTNSAACRSIGYPF
LPQLCRIYLDMLNVYKVTSENINSAVTLHGESVLKQPLIKCMRAVKTEVLRLINTWISTL
SSISESARIPELPSIYMSFVPPLFDTVLFDYQRNVPSAREPEVLSACTVLITQMKEKVSE
DVPKILDALFGCTLEMINKDFEDFPEHRINFFQFIRSIIVNCFTGNIEELKKKPLMLIPP
AQFTLIVDAIVWAFKHTTRNITEIGLEILDRLLDSFSTKVSPDMAQSFYQQYYLTILSHL
LSVVTDSTMAQVAGLTVFAVTLGRMFRELEEGLIKVPLQGPGQVKSNVEYVLEYTFELLK
KAFPHLTDEQVRIIVQGILSYDNDVEKLKEHLRDFLVQIKEYTGEDTSDLYLAEKEQEVK
AAMEAKRRAAEAVPGILNPHEISEEMIEEPMGNGPALNA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaatattagtaaaagctagcaaattgttggaatttaacactccggtcatt
gacgtctcacttcttgatgcggttattaatttgatgtattgcggtacaggagaaatacaa
agaaaagctcaagagattttaactatgttgaaagaaaacaacgaagcttggactagagta
gatgctgtattggaatattcgagaagtttacagtcaaagtactttgctttgcaaatctta
gaaaaccttgtcaatactcgttggcgtcgccttccccgcgatcagtgtgatggtatcaaa
aagtatttagtcgatcgcattattagtatatcttccaatcctagtctttctgaagatgaa
aaagtatttctgaacaagatgaacatggtattggtgcagatcgttaaacgggaatggcca
aaacactggcctacgtttatcagtgatattgttgggtccagtcgttccaatgaatcattg
tgtcgaaataatatggtgatcctgaaattgttaagtgaagaagtttttgatttttcttct
ggtcagatgacacagacgaaggcaaatcacatgaaacagcagttttgctctgaatttcgt
gcaattttcgagctatgtcagcatattttggagagttcgaccaatgttatgctggttgaa
gccacgttgaacacattgctcggcttcttagtttggattcctgttggttacatatttgaa
acgaacttgatcgaaagtcttactgcgaagtttctaagcatcctgccgtttcgtaatgtc
actttgatgtgcctgacagagattgcgggtgttacttttccgaaaaatgcgcccccggct
tattcttctacaatatgccgactgttttctcgaacgatgcagcagttgaatactgtacgt
ttgaatatgctcccaccgcatacaaacattccagaagcttatgcgatgggtaatgacaat
gaccaaaaatgcatctcaaatctcgctctgtttttgtctacgatcttgcggcagcattgc
aagattattgaagctgaatgcaaagaaaaaattggagagttgttgggcacaccttttgat
ttggcaatgaattatttgttggcaataagcgaagtcgacgatatggaagtattcaaaata
tgcctcgattattggaattggctagttgctgaactgtatcgagaaccgcccttaacgaat
cctctgctaaccatgaaccttgctattcagttgattcgaaaagattcactgtgcactcgt
tatcattatgtcccatacttgagtcgactgcgcagtgtgattatcagtcgtatggcgaag
cccgaagaagttttggttgttgaaaacgatgaaggcgaagttgtacgtgagacgatcatg
gatacagacgcaataagcctttacagaaccatgcgagaaacgttggtatatttgactcac
ttggactgtgccgatacggagagaataatgactgaaaagttgcaaaatcaaaccaacggg
tctgagtggtcttggaaaaatttaaactgtctttgttgggcaattggatcgatcagtggt
gctttaatggaagaggacgagaagcgttttctagttatggttattcgcgatttgcttggt
ttgtgcgagcagaaacgtggaaaagagaacaaagctgtgattgcgtcgaatataatgtac
gttgttggacagtatccaagatttctcagagctcattggaaatttttgaaaactgtcatt
aacaaactttttgaattcatgcacgaaacacacgaaggtgtacaagatatggcctgcgac
acgttcattaaaattgctaacaaatgtcgacgtcattttgtcattattcaagctggagaa
aaggagccgtttattgaggaaattttggcctctttgaacacaatcatttgtgatttgtct
ccggctcaggtacatgtgttttatgaagcggtcggttataccatcagcgcgcaacctgta
caaattgtccgggacaatttgatcgaacgtttgatgtctctgccgaatcacacatgggat
gatgttattctcaaagcgacaacgaatgtggaaattttgaaagacattgaagttgtcaaa
aacctggtgaacattttgaaaacgaacagcgccgcctgcaggtcaattggttatccattt
ctcccacagctctgtcgtatctacttggatatgttgaatgtttacaaggtcacgtcggaa
aatattaattccgcagtaacattgcatggcgaatctgtactgaaacagcctttgatcaaa
tgtatgcgcgctgtgaaaacggaggtgctacgtttgattaatacttggatatccactctc
agcagcatcagcgaatctgctcgaattcctgagctgccatcgatatacatgagttttgtt
cctccactttttgacactgttttattcgattaccagcgcaacgttccctctgcccgtgaa
ccggaagtgctgtccgcttgcacagtgcttatcacgcagatgaaggaaaaagtttctgaa
gatgtaccgaaaattttggatgcattatttggctgtactcttgagatgatcaataaggac
tttgaagacttccctgaacacaggattaattttttccagtttattcgttccataattgtt
aactgttttactggtaatattgaagaattgaagaaaaaaccgctgatgttgattccaccg
gcccagttcactctgatcgttgacgcgattgtttgggcatttaaacataccacccgtaat
attactgaaattggtttggaaattttggatcgtcttttggatagtttctctactaaagtc
agtccagatatggctcaaagcttttaccagcagtactatttgaccatactgagccatctg
ttgtcagttgttacagacagcacaatggcacaagttgctggtctgacagtttttgctgta
acacttggcagaatgttccgtgaattggaggaaggcttaatcaaagtacccctacaagga
cctggtcaagtgaagtcaaacgttgagtacgttttggagtatacattcgaattgctgaaa
aaggcttttccacatttgacagatgaacaagtgcgcatcattgtgcaaggaattttgagc
tacgataatgatgttgagaaattgaaagaacatctgcgtgattttcttgttcaaatcaaa
gaatacactggcgaggatacatcagatttatatttggcggaaaaagagcaagaagtaaaa
gcggcaatggaagcgaaacgccgagcagctgaagcggtgcctggcatattgaatccgcat
gaaatttctgaagagatgatcgaagagccgatgggaaatggccctgctttaaatgcttga
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