Trichinella spiralis: Tsp_03089 Help Entry Tsp_03089         CDS       T01609                                  Name (RefSeq) ubiquitin family protein   KO K23390   large proline-rich protein BAG6 Organism tsp  Trichinella spiralis Pathway tsp03060   Protein export Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03060 Protein export     Tsp_03089  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tsp03400]     Tsp_03089 DNA repair and recombination proteins [BR:tsp03400]  Eukaryotic type   Check point factors    BAG6-UBL4A-GET4 complex     Tsp_03089 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ubiquitin Rad60-SLD Rad60-SLD_2 DUF3549 Motif Other DBs NCBI-GeneID:  10900368 NCBI-ProteinID:  XP_003379428 LinkDB All DBs Position Unknown AA seq 1572 aa AA seqDB search MDDEDSPIPGDPFDSSDDDDIEAGSGGKVLLKSLHENKHKARELPNGAGGQLQTWSRLTY LCLSSFILGCMVSIIGPTVPILLRQNNGPSFSMGFSVVSASAAGSVAGILSGRFSLFLED WNKQFRLISLIYMCFSVGGAVPLLIYALNVSESPSTATDFTTSAITKRSLSNDSSLGNGT FGKVVNESVTSWTSVSPAPVKPKFVDSAGLKTDETYAARKEKELKHIELNAKAKEKMQTQ STVTEPANRTSEFNSTTDDIELPNEKITERLLNNSETTTIATVTTLLSTLTTTTPPPPTT TPYVSTLTSEVISTASWSETTIETMSTVLPDEVISVRDVVVKIVENDRLELAYHTAAGMG FFVLAILMAVYCASCRMCSGSAGVGRPQMIMVSCENAGSVYQLKTLTVGLLFVLFIAGVE WTLATITVSYLLVEHQRSLSDSVALCAVCWCLSCGSRLVSLCCSFSRHLLGVCLVISALL SGVLALSRSYSAVAVLLCAYAASVGPLLPATFHWFNQQAGLPAQLVTVWLLAINLSRALV PLAVGALVEIGMRNFQTALLFMTSLSLLLFIPLEKWTKQSKHYSDALSVSMSRRGRHNFF NRRDHYYTSFKANRATADRLSTNENNNSDDDVTDDDEILHFYKPHSKSRLPSLASLLFGL TMQYRVTVKTLDGHDRAFELDPETTVGQFQERIAAEMNVPVDRQRVIFHGRVLDPSSTVK DLGKLTIDHLNEKVIHLVEKMEGPPPAPPSTTSTTNAQNAQQAPGNDSGSNAVHPHIFLG TVALPPNDLTSEQIYTIIREVLDEFGFSGQAATIQLQEPEGSDDVAEIVQYARRMQGEHS LSNTAANDKESDASSLAEIKKEGEESAAMHDGEEKPPESSVPVDQSTQTDANASSASNSR RQRNATFQDLANLFSFLSTTVRDLLALLQNCELLLEAERHFEPFAQIRVMIHQQNSNADA RTQSSGDIFENQNNNAEANGRTLSRRDDSSALRRVESTLNSPAFAESLSRDLTNMIHSVN EATGSMMDFVTIMNRGSRHSSDNHVGNYLRVRHGNTLMRHPSERPRGINRFYGQVLNLPP NSTVNISFPSRSGFGRTRQQRQQPGADTTTPASSGRSGGGAAPFRNFHEGASAQVNTSNS QASNASTSRSGSNVQAASRSTTATDNTAATFDRNSPAAREIRSTIEQLANAILDTMNEMQ PFELVNSLYRLLANSLVAGDVVDILQGNYETLDRFRSIMRRYFIENLLNGNERPSQEDMR QAAHRAAESEIPYCRRLAELLPEQNEIDLLSSLISCEEDTVYRLLLLCFGKDSNEAFGQR LYKNLLLGVKQTLAVVVYTYAPNGEVDERIVRIMTSATLRDVPEYVRRAFDSFGAGVLQT VLAETLLPREEVSGFFVKKHATTAERHENRQGSAASENNNILTTAADAFAGEPMIVEPDS VDNLNNQPTELDLQQVALCNCTIEKDDDTPSVRASINSLPPEVIASLPIVVQSGRLNLDD DQRQLFHDALANAITSSESAESAPAVRNLLNSSEIVSEAVENFMKEKIQRRLRYDRDFTP VLFPSSYEYFKP NT seq 4719 nt NT seq  +upstreamnt  +downstreamnt atggacgacgaagatagcccaatacctggtgatccgttcgactccagcgacgatgatgac atcgaagctggaagtggaggaaaagtattgttgaaatcgcttcatgagaataaacacaaa gcgagggaattgcctaatggtgccggtggacaattgcaaacatggtctagactcacttac ttgtgcttgtctagctttattttgggttgtatggtgtcgattattggcccaacggttcca atattgttacggcagaacaacggaccatcgtttagtatgggcttttctgtagtatctgcg agtgcagctggtagtgttgctggtattctatccggtcgtttttcgttgtttttggaggac tggaataagcagtttcgcttgattagtttgatttatatgtgtttctcagtgggtggagca gttccgttgttgatatacgcgttaaacgtgtccgaaagtccgtcgacggcaactgatttt accaccagtgcgatcaccaagcgaagcttgtcgaatgatagctcgttgggcaatgggact ttcggcaaggtggtgaacgaaagcgttacatcttggaccagcgtgagtccagctccggtg aagccgaaattcgtcgattcggcaggtttgaaaaccgacgaaacgtacgcagctcgaaaa gagaaggaattgaagcacatcgaactgaatgctaaagcgaaggaaaaaatgcaaacccag tcgacggtcactgaacctgcgaacagaacgtcggaattcaattccaccacagatgacatt gaattaccgaatgagaaaattaccgaaaggcttttgaataacagcgaaacgactactatt gccactgtaacaactctgttgtcaacgctgacaacgaccacaccaccaccaccaacaaca accccttacgtttcaacgttgaccagtgaagttattagcacagcatcttggtcagagacg actattgaaacgatgagtaccgttttgccggacgaggtgatcagtgtgagggatgtggtg gtcaagatagtcgagaatgatcgactggaattggcttaccatacagctgccggaatggga ttctttgtcttggccatattgatggcagtgtactgcgcttcgtgcaggatgtgttccggt tccgccggtgtgggtaggccgcaaatgatcatggtctcttgtgaaaatgcaggctcggtt taccagttgaagacgttgaccgtcggcttgttgtttgtgctgttcatcgccggcgtcgag tggaccctggctacgattaccgtcagttatctgctggtggaacaccaacgcagtctgagc gacagcgttgcactgtgcgctgtatgctggtgcttgtcgtgcggcagccgactggtgtcg ttgtgctgctctttctccagacatctgctcggcgtctgtttggtgatctcggctttgctt tccggtgtcctggcgctcagccgctcctacagcgcagtcgcggttctgttgtgcgcctac gccgccagcgtcgggccactgcttccggccacgttccattggttcaatcagcaagcaggc ttgccggcgcagctcgtgaccgtatggctgttggcgataaatttgagccgggctctggta ccattggccgtcggcgcgttggtcgaaatagggatgcgaaacttccagacggctctgctg ttcatgacttcgctcagcttgttgctcttcataccgttggaaaagtggaccaagcagtcg aaacactacagcgacgctttgtcagtgtccatgtccagacgaggtcgacacaacttcttc aatcgccgagatcattattacacgtctttcaaagcaaaccgagcaactgctgatcggctg tcgaccaatgagaacaacaactctgacgacgacgtcactgatgacgatgaaattctccat ttttataaaccgcactcaaaatctcgtttaccatctttagcgtcgcttctttttggcttg acaatgcaatatcgagttacggtgaagacgttggacggacacgatcgggcttttgaattg gacccggaaaccaccgttggccagttccaggaacgcatcgcggctgaaatgaacgtcccg gtcgatcgacagcgggtgattttccacggtcgcgttttggatccgagttcgacggtgaaa gatttgggcaagttgaccattgatcatctgaacgaaaaagtgattcatttggtggaaaaa atggaaggtccgcctcctgcgcctccttcaactacgtcgaccacgaatgcgcaaaatgca caacaagcacccggaaacgattctggttccaatgcggtgcatccgcatatatttttaggc acggtcgctttgccgccgaatgatttgacttctgaacaaatatatactattattcgggaa gtgttggacgaatttggtttttctggccaagctgctactattcaattacaggaaccggaa ggatctgatgacgtggccgaaattgttcaatacgcacgtaggatgcaaggcgaacattcg ttgtcgaacactgctgcgaatgacaaagaatccgatgccagttctttggcagaaatcaaa aaggaaggagaagaaagtgctgctatgcacgatggtgaagaaaaaccacccgaatcaagt gtgccagtagatcagagtactcagactgatgcaaatgcctcttccgcatccaattcaaga cgacaaagaaatgcgacatttcaagatttggcaaatttgttctcttttctctcaacaact gttcgagatttgcttgcactacttcaaaattgtgaactgctgctggaagccgaacgacat tttgaaccttttgcacaaatcagggtgatgattcatcagcagaatagtaacgccgatgca agaacgcagagttcgggggacatttttgaaaatcagaataataatgcagaagcaaatggt agaactttgtcgagacgagatgacagctctgcacttcgacgtgttgaaagcaccttgaat tcgccagcttttgcagaatctttgtctcgcgatttgacgaacatgattcactctgtcaac gaagcgacaggaagtatgatggactttgtgacgataatgaaccgtggttcgcgtcattca tctgacaaccatgttggtaattatttgcgcgtccgtcatggcaatacgttaatgcgacat ccgtccgaaagaccaaggggcataaaccgtttttatggacaagtgctgaacttgccccct aacagtactgtgaacatttcttttccttctcgtagtggatttggtcgaacgcgccaacaa cgtcagcagcctggcgcagatactactactccggcttcttcaggacgttccggtggtgga gcagccccattccgcaactttcatgaaggagcatccgcacaagtgaacacttcgaactct caagcttcgaatgcatcgacgagcagaagtggttcgaatgtccaagcggcaagcagaagc accactgcaacggacaacaccgccgccacgttcgatcgaaattctcccgcagcacgcgaa atacgttctacaatagagcagctggccaacgcaattctggacactatgaacgaaatgcag ccatttgaacttgtgaacagtttgtaccgcctgttggcgaacagtcttgtcgccggcgac gtggtcgacattttgcaaggcaattacgaaacgttggatcgtttccgcagcatcatgcgc cgctattttatcgaaaatttgttgaacggaaacgagcgaccatctcaggaggatatgcgc caagctgcgcatcgtgccgctgaaagtgaaataccctattgtcggcgtttggctgaattg ttgcctgaacaaaacgaaattgaccttttgagcagtttgatcagctgtgaagaggatact gtttatcgtttgttgcttttgtgttttggaaaagattcgaatgaagcattcggacagaga ttgtacaaaaatttacttttgggcgtaaagcaaacgttggccgtggttgtttacacctac gctccgaacggtgaagttgacgagcggattgttcgtatcatgacaagtgctactttgcga gatgttccggaatatgtacgccgggcgttcgacagttttggtgccggtgttttgcagacc gtacttgcggaaacgttgcttccaagggaagaggtgtcgggattttttgtgaaaaagcat gcgacaacagcagaacggcacgaaaacagacaaggttcagcagcatctgaaaacaacaat attcttaccacggctgctgatgcttttgctggtgagccgatgattgtggaacccgattca gtcgacaacttgaacaatcagccgacggaattggacttgcaacaagtggcgttgtgcaat tgcaccattgaaaaagacgatgatacgccgtcggttcgggcgtcaatcaacagtctacca cccgaagtaattgccagtttgccaatagtagtgcaaagtggacgactgaatttggatgac gatcaaaggcaactgttccacgacgcgcttgccaatgcaatcacgagttctgaaagtgcc gaaagtgcccccgctgtgcgcaatttgttgaattcatcggaaattgtttccgaagctgtg gaaaatttcatgaaagaaaagattcagcgtcgactgcgatacgatcgcgatttcacgcca gtactgttcccatcgtcgtatgaatatttcaaaccgtaa

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