Trichinella spiralis: Tsp_03101
Help
Entry
Tsp_03101 CDS
T01609
Name
(RefSeq) putative anaphase-promoting complex subunit Cdc20
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_03101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_03101
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03101
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
Tsp_03101
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
Tsp_03101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_IFT122_1st
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
10900484
NCBI-ProteinID:
XP_003379440
UniProt:
E5S2N9
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MNSFNISFTSSNNSSSRSLRSVHSNSSTSKSCVSLKQKVQLFPSRKARREHQLNADRFIS
TVDHFPCSSNVESEQQKKEFIPRHVDDLEYSRAVRSTLLTPNRELNKPTVTMSLSEEEKA
PRTLNFNKRKTGCRFSTLTIANLFPSPYKVKPFRKLSISCVRKFEAAYVPDDFYLNYLDW
GKNNFIALGVGGEIIFLKGTSDRGELTCSSGSFPLDVTSVKWSSINEEQIAIGMASGDVQ
LYDLETESVLISFEKMYGSVCCSAWNDNVLTCGDDQGNIFNFDKRAAGRCVLRVLGHSGL
VCGLSWSDDKRRLASGGNDDTVRIWSLAKTSGAENAVTEYCGHSSAVKALAWCPFNNALL
ASGGGIRDATLRIWNVCNGKQVKRVNTKSQVSGIVWQRRHSELISSHGNAENDLKVWNYP
DMNIIKAMPAHSDRILCMVLSPCEHFIATISADNMLKLWEIFDE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttcaacatttctttcacgtctagtaataacagttcgagtagatctttacgt
tctgttcattcgaattcatctacttcgaaaagttgtgtcagtttgaagcaaaaagttcag
ttgtttccttcgcgaaaagcacgccgtgaacatcaactgaatgccgatagattcatttct
acagtagatcattttccatgctcttctaatgtggaaagtgagcagcaaaagaaagaattc
attccgcgtcatgtggatgatctagaatacagccgcgcagttcgaagtactttactgact
ccaaatcgtgaactcaacaagccaacagtaacaatgagcttgagcgaagaagaaaaggct
cctagaacgctgaactttaataaaaggaaaactggctgcagattttcaacgctaaccatc
gccaatctatttcccagtccatacaaagtgaagccgtttcgaaagctatccattagttgc
gtacgaaaatttgaagcggcttacgtaccggatgacttttacctcaactatttggattgg
ggaaagaacaattttattgctcttggcgttggaggcgaaattatcttcttgaaaggaaca
tcagatcgcggtgagttaacctgttcttctggtagctttccgttggacgtgacttctgta
aagtggtcttccataaatgaagagcagattgccataggcatggcttcaggtgatgtgcag
ttgtatgatttggaaacagaaagtgtgttgatcagttttgaaaagatgtatggttccgtt
tgttgctctgcttggaatgataacgttcttacctgtggagatgaccaaggcaacattttc
aactttgacaaacgggcagcagggcgatgcgttctccgagtactcgggcacagtggattg
gtttgtggactgagctggtcagatgacaaacgccggctggcatcaggcggcaacgatgat
actgttcgcatttggtcgttggcaaaaacatcaggagccgaaaatgccgtcactgagtat
tgcggccattccagtgcggttaaagcgcttgcctggtgtcctttcaacaatgctttgctg
gcttcaggcggtggtataagagatgcaactcttcgaatttggaatgtgtgcaatggcaag
caagtgaaacgcgtcaacaccaaatctcaggttagcggaattgtttggcagagaagacat
tccgaacttatcagcagccatggaaatgccgaaaatgacttgaaagtttggaactatccg
gatatgaacatcatcaaagcgatgccagctcacagtgacaggattctatgtatggtgttg
tctccatgcgagcatttcatcgctacaatttcagcagataatatgcttaaattgtgggaa
atttttgatgagtaa
DBGET
integrated database retrieval system
