Trichinella spiralis: Tsp_03111
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Entry
Tsp_03111 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsp01001
]
Tsp_03111
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_03111
Enzymes [BR:
tsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Tsp_03111
Protein kinases [BR:
tsp01001
]
Serine/threonine kinases: Other
Other
Tsp_03111
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Tsp_03111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YxiF
DUF2457
CDC45
Motif
Other DBs
NCBI-GeneID:
10900494
NCBI-ProteinID:
XP_003379450
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MSSIVALEHLTLVQITYCKKSRTKYTEMSTDNEEDSRALFDDPRFRNQTTAEIITEIFLQ
FTDEYNWSDGISDLEIMAKAFEDTFQRYVQSDPDPMECLHEETFFRLFNCNSFFKGFYPK
LLIKLFQQYLHNTDHVVIYVVGRILAAMSMYIPMEPIIRDFFLTEPRAVEIICSRALMRN
SPMQMHALSILVGMIDIVKSVEPYSSWKSKNIEVMHVILPQLWTLANRTVTRNVGTASRS
EGEIQHSNKRNRVASDGASTSATCSKQARLSSELNSPAKVDADVMRLYLIFKNLPDDNQM
ILIILRYISATCVYCEVANQHRILDLLFHFLKFENTGSDLIVFQAAQCMGILFEHPKLML
EFVQHGGVTLFTGVSTSSVAACSVARTLTQLSAEKEPMDRISNLGTDAILALVTFVIALL
ENFHESARYYGAMFLGDALKYRTILKIFDRVGGLRSLLNCLASVYNRHPTSLNPFLSLES
QTSWRFTAKFVIQALSSYFESHIYFYAEDLGLQQRSKRHLFVSQASSSSSSSSSSAAAVA
LSNNNAPVCSQVMVANQEVLEKCIRFLSTALAQSPSWHVIEQFRQLDGLRCVLRLTENVF
HSPPGIHSRGEIVFYSLNVCRFVSVHPAVQLDLLKMLPQNWFSSKKTGFQIIIPICQEMK
NSLSSHEVLDIMVNCVCGPLDKYKCLPNSEKVGFGNDANTVRSSEELLKMIWKAVRQENP
LLDFIYKSVSSEVEEKGARIALMALNGLCRDESIKQMLMQLPLIADNELLDLVKESGVLQ
KRKQGQSFRKQVQKFLKQVVGVEVVTNESFRNDQLYKEKVTNDMVIQYDQREIHLLIFRK
LCEDGMFETAKKLYDEAGLSVYNDLLFKQPQSAREDRVYSQSSGMIVEKQQAVRSEGGNR
VWAVRPVSSVGSSFSGPSDFTPKSSNNFRRPNRFLFPACCSESSIKTLSNSQLQNPTFPS
NMVSLDNVMNDYFRSQHRACPKPIAGCMEFSAFFFFHQAKLTGRRRIPHYFFSKHRCPEP
KPPVSVPTNLAARFFNRPYFRFRGIVDSYDEDWKFIYSRLRFDQFVLANANLNPSFCSAF
LPDGSALYYGTINGIVHAMNMNDRTIMPDHYAYHDSSLLPPVANIAFSEFHPFMLVSHPG
THSFCLLWSLNDSTTPKHMFDDKYAEFSHVNEDRMLGTKSLQANVYDVETGVRVVKLFKT
SLANRYERNRAHFHPQADIVLSDGILWDPRTTDVIHKFDKLNPRVAGEFHPNGSEWDMRT
YRLMKSIFELDNKKLTFNKTGEVIFAVLEEYDEEVSSSNRADNCESLLYDHFISVYNARD
YSLIHRFDIKRYVVHVAVNPFDTHLSVIASNFASDGFDIDKSTCVLYQVGRKAKLNLQDG
ISNEFLIDQEDVEDAYQSDDDDDDDDDDDDDDDDDDEGGTGTYENNAAWLPRNALQRNLT
NEQLLSDGESSTSSYLSENSRHMNRSSGSDQSASSEYSGSEEDSTYYSDSGTSYSSY
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgagctccattgtcgcattagaacatcttacattagtgcagattacgtactgtaaaaaa
tcaagaacgaaatatactgaaatgtctactgataatgaagaggattcaagagctttgttt
gacgatccccgttttcgcaatcagacaactgcagaaattataaccgaaattttcttgcag
tttactgacgaatataattggtctgatgggatatctgatttggagattatggcgaaggca
tttgaagatacgttccagcgatatgtacagtccgatcccgatccaatggaatgtttacat
gaagaaactttttttcgtttgtttaactgcaattcattttttaaaggtttttatccgaaa
cttttgatcaaactttttcaacagtatctgcataatacggaccatgtagtgatatacgtc
gtcggacgaatattagctgctatgtccatgtatatacctatggaaccaataattcgagac
ttttttttgactgagccacgagcagtagaaattatatgcagtagagcccttatgcgtaac
tcgcctatgcaaatgcacgccttatctattctggttggcatgatagacattgtgaaatct
gttgaaccatattcttcgtggaaaagtaaaaacatcgaagtgatgcatgttattctgcca
cagctttggacgctggccaatagaactgtcactagaaatgtcggcaccgcaagtagatct
gaaggagaaattcagcattccaacaaacgcaaccgagtggcatcagatggtgcatccact
agcgccacttgttccaaacaagctcgtttgagttcagaattgaactcaccagcgaaagtt
gatgctgacgttatgcggttgtacttaatctttaaaaatttgcccgatgacaatcaaatg
atattgataattttgcgctacatcagtgcgacgtgtgtctattgtgaggttgccaatcag
cacagaattttggatttgctgtttcactttttgaaatttgaaaacactggaagtgatctt
attgtatttcaagctgctcagtgcatggggattctttttgaacatccgaaactgatgctg
gaatttgtccaacatggtggtgtgacgttgttcaccggtgtgtcaacgtcgtcagtggcg
gcatgcagtgtggcgcgtactcttactcagttgtccgccgaaaaagagccaatggataga
ataagcaatctgggtacagatgcgatcttggcattggtcacatttgtgattgcattgttg
gaaaattttcacgaatcggcacgttattacggggcaatgtttttgggtgacgctttgaaa
tatcgcacaatattgaagatatttgacagggttggtggtttgcgctcgttgctcaattgt
ctcgcatcggtttacaatcgtcatccaacctcgttgaatccttttctctctttggagtcg
caaacttcgtggcgcttcactgccaaattcgtcattcaggcgttgagctcatatttcgaa
agccatatttacttttatgcagaagatttgggacttcagcagcgttccaaacgccacttg
ttcgtttctcaagcttcttcttcttcttcttcttcttcttcttcagcagcagcagtagca
ctgagcaacaacaatgctcctgtttgcagtcaagtgatggttgccaatcaggaggtactg
gaaaagtgtattcgctttttatcaactgctctggcacagtcgcccagttggcatgtcatt
gaacagtttcgacagctcgacggtctccgttgtgtattgcgtttgactgaaaacgtcttc
cactcacctccagggattcatagtcgtggtgaaattgtgttttattcgttgaatgtttgt
cgctttgtgtctgtacatcctgctgttcagttggatttgttgaaaatgttaccacagaat
tggttttcatccaagaagacaggatttcaaattatcattccgatatgtcaagaaatgaaa
aattcactgtcttcacacgaagttctcgatattatggtcaactgtgtttgcggcccacta
gacaagtacaaatgtttaccgaacagtgaaaaggtgggctttggaaatgacgccaataca
gtacgctccagtgaggagcttttgaaaatgatttggaaagctgttcgacaggaaaaccct
ttgttggattttatctacaagtcggtatcatcggaagttgaagaaaaaggggcccgtatt
gctttgatggcactgaatggtctatgcagggacgagagcatcaagcagatgttgatgcag
ttgccgttgattgctgataacgagctgttagatttggttaaagaatcaggtgtacttcaa
aagcgaaaacaggggcaatcatttcgaaaacaggtgcagaaatttttgaagcaagttgtc
ggcgttgaagttgtcaccaatgaaagtttcagaaacgatcagctttacaaggaaaaagtg
acgaacgatatggtcatccagtacgatcaaagagagatacatttattaatatttcgaaag
ttatgcgaagatggtatgtttgaaacggcgaagaagttgtacgatgaagcgggattatct
gtttacaatgatttgcttttcaagcaaccgcaaagcgcacgagaagatagagtgtattct
cagtcgagtgggatgatagttgaaaagcagcaggctgtacgttctgaagggggaaatcgc
gtttgggctgttcgtccagtcagttctgttggatcttcattttccggcccatcggatttc
acaccaaagtcgtcgaacaattttcgtcgacccaatcgattcctttttccagcttgttgt
tcagaatcttcgatcaaaactttatccaacagccagctgcaaaatccaacttttccatca
aacatggtctcgttggataacgtgatgaacgactactttcgaagccagcatcgtgcttgt
ccgaaaccaatcgctggttgcatggaattttctgcatttttctttttccaccaagctaaa
ctaactgggcgtcgtcgtattccgcattattttttcagcaagcatcgctgtccagaaccg
aaacctccagtgtcggttcctacaaatttggctgcacgatttttcaatcgtccatatttc
cgatttcggggcattgtcgatagttacgatgaagattggaaatttatctacagtcggctt
cgtttcgatcaatttgttcttgccaatgcgaatctgaatccttcgttttgttctgcattt
ttgccggatggttctgctctttactatggtaccataaatggaattgtccatgcaatgaac
atgaacgaccgcacaataatgcccgaccattacgcttaccacgattcgtcgttgttacca
ccggtagcaaacattgctttttctgagtttcacccttttatgctggtttcacaccccggc
acgcacagcttttgcttactttggtcgttgaatgattcaacaactcccaaacacatgttt
gacgacaagtatgctgaattcagccacgtcaatgaagatcgtatgctcggaactaaatca
cttcaggcgaacgtatacgatgtggaaactggcgttcgtgttgtcaagttgttcaagacg
agccttgccaaccgctacgaacgaaatcgggcccacttccatcctcaagcggatattgtg
ctttcagatggaatattgtgggatccgcgtacaactgatgtgattcacaaatttgacaaa
ctcaaccctcgcgtagcgggcgaatttcatcccaacggatccgagtgggatatgcgcaca
tatcgcctgatgaaaagcatctttgaattggacaataaaaagttgacgttcaacaaaacc
ggcgaagtgatatttgcagtgcttgaagagtacgatgaggaagtgagcagcagcaatcgg
gcggataattgcgaatctctgctctacgatcatttcatttccgtgtacaatgcgcgcgat
tattcgctgatacaccgttttgacatcaaacgatatgtcgtgcatgtggctgtgaatccg
tttgacacgcacttgtcagtgattgcgtccaattttgcatctgatggattcgatattgat
aaaagtacttgtgtgttgtatcaagtgggcaggaaggcaaagttgaatttgcaggacggc
ataagcaacgaatttttaattgaccaagaagatgttgaggatgcttatcaaagtgatgat
gatgacgatgacgatgacgacgacgacgacgacgacgatgatgatgatgaagggggtaca
ggaacttatgaaaataatgctgcttggctgccgagaaatgctttgcagcgaaatttaacg
aacgaacaattgctcagtgatggtgaatcgtccacttcatcctatctttcggaaaattca
aggcacatgaacagatcttccggatctgatcagtctgcatcttccgaatattcgggaagt
gaagaggacagtacttattattcagatagcggaacaagctattcgtcttattga
DBGET
integrated database retrieval system
