Trichinella spiralis: Tsp_03196
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Entry
Tsp_03196 CDS
T01609
Name
(RefSeq) GTP-binding protein yptV4
KO
K07880
Ras-related protein Rab-4B
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_03196
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_03196
04031 GTP-binding proteins [BR:
tsp04031
]
Tsp_03196
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
Tsp_03196
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
Tsp_03196
GTP-binding proteins [BR:
tsp04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
Tsp_03196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Cystatin
Arf
GTP_EFTU
Cathelicidins
Gtr1_RagA
MMR_HSR1
SQAPI
AAA_7
SRPRB
AAA_22
AAA_24
AAA_16
Septin
ATPase
AAA_29
P-loop_TraG
ABC_tran
Motif
Other DBs
NCBI-GeneID:
10908447
NCBI-ProteinID:
XP_003379538
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MPETYNYLFKFLIIGNSGTGKSCVLHQFLENKFKQDTAHTIGIEFGSKVVKIQDRSIKLQ
VWDTAGQERFRSLTKNYYNGAACALLVYDITCRQSFNAIAQWLSDARSLASPQIIVILIG
NKKDLEDRREVTFMEGSQFAQENGMLFLETSALTGENIEETFLRCARSILTKIESVVVGE
PIVGGLTPADDDDPKVRQMIQYAVQQLNEKSKEPFLRKLISLKNAAVQVVQGALYHLNIL
VAETDCKKGENVENVQNCKTTPDGLSQECFIKIWEREWLNFIKVMKTKCKEASLPTVNIT
DTSKPADDPQVGVIATPENSTIPAEEIITTVAVDQEDDQQSSTALISSDAEIAATLLTIT
TIDDSLTNKTEPSDM
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagacatataattatttgtttaaatttcttattattgggaactcgggaactggc
aagtcctgtgtacttcaccaatttttggaaaataaatttaaacaagacaccgcgcacacg
attggtatcgagtttggttcaaaagttgtgaaaattcaagatagatcaataaaattgcaa
gtatgggatactgctggacaagaacgcttccgttcattgacaaagaattattacaacggt
gcagcgtgcgctcttcttgtttacgacattacatgtaggcaaagtttcaacgctatagca
cagtggttgtctgatgccagatcacttgccagtcctcagattatagtaatattgattggt
aataagaaagatctcgaagatcgccgagaggtgacttttatggaaggtagtcaatttgct
caagaaaatggtatgttatttttggaaacgagtgctcttactggtgaaaatattgaagaa
acatttctacgatgcgctcgatctatacttacgaaaatagaatcagtagttgttggtgag
ccgattgtcggcggactgacgccagccgacgacgacgatccgaaagtgcgtcagatgata
cagtatgccgttcagcagttgaacgaaaaatccaaagaaccatttttgaggaagttgatt
tcactgaaaaacgctgcagtgcaagttgttcaaggggcgttgtatcatttgaatattttg
gtcgctgaaactgattgcaaaaaaggagaaaatgttgagaatgtgcaaaattgcaaaaca
acaccggatggtttgagtcaagagtgtttcatcaaaatctgggaacgggaatggttgaat
tttatcaaagtgatgaaaaccaaatgcaaagaagcaagcctgccgacggtgaatatcacc
gacacttcgaaaccggccgacgatccgcaagttggagtcattgccacgccggaaaatagc
accataccagccgaagaaattattacaacagtcgctgttgatcaagaagatgatcaacaa
tcatcaacagcactgatatcctcggatgcagaaattgcagctacacttcttacgatcacc
accatcgatgattcactaacaaacaaaactgaaccttctgacatgtga
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integrated database retrieval system
