Trichinella spiralis: Tsp_03419 Help Entry Tsp_03419         CDS       T01609                                  Name (RefSeq) putative PWI domain protein   KO K12822   RNA-binding protein 25 Organism tsp  Trichinella spiralis Pathway tsp03040   Spliceosome Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     Tsp_03419  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tsp03041]     Tsp_03419 Spliceosome [BR:tsp03041]  Complex A   U1 snRNP components    U1 related factors     Tsp_03419  Complex B     Tsp_03419 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PWI RRM_1 Seipin PFF1_TM Motif Other DBs NCBI-GeneID:  10909403 NCBI-ProteinID:  XP_003379765 LinkDB All DBs Position Unknown AA seq 936 aa AA seqDB search MAFPPRFGMPSIAQATFVPTYNAVPVVLPTTAHYLMPTLANSGVVRNVVQKTPSPAPLTK RQEILMEKPPVTTVFVGNINEQATNEMIKAMLVKCGNIISWKRIQGPNGKFQAFGFCEYD HPDSTLRALRLLHDWPLGDKKLVLKCDEKNKSMLIDFINKRRSLYNKPPLKMEGDQLPAD DEIRKEDEMFRKALKNLVKEMAPELFEGTSKSHVPKSPTLTGKGGNLDIESLDRDRKEYI AKEIIQFREAHKVSFCFWVQYLATTLMLYLRYSFCYILHCAHHSLPVIATSFFFAEFLRE NGIRRVLNCTDYDDKEARLKGKSASVDVNEKNERFTERPSTPLEADRRASTKFERNCATD SADAKVGEARGRRRGSTPETGSRRRRSPSADRLLETSEDAREREKLERKAREKEKNYLER LEKLEAREKRKAKERLKQAEKEKRRKKEQLADIKIMQEFLEDYIDEEGDLEFYQGKSLLL RKDAITDEMEWDALDRLREAEEIALIRRKLIEENSSKDSNETKIMVEELPVNPVKLEEQQ RTVSESETDKAADNNDNNADEVDSAVPKVKKETVLIPTVFLPAQAENSQPIGFAGLKLGS VSTSTNTAAPIPLQQMFNEPDEEFSVVKTSSRKLVPLEYTEEEKRALEMPNMHTQMSTEE RKKYVKSLIDKIPSSKEELFKYEIHWEYVDQLLIDRRIKPWISKKIIEYIGEEEASLVDF ISEKVLERSTPQGLLDDISMVLDEEAGVFVAKLWRLLIYEIEAKRKQTCGIFILTVLIRH FFVSDLHNVELPLNFIFETCEKYGVCSYPVANVSLQNRNGQSLFEVDFYYDVLFELTVFP DSVRPTSGMIMLIVRCYSGENLLTYSFPRSTILIYRPWPWRLIRIGAAKYRNEYCSLVNY SAAVLKVTEIQHPTYKENIAFSFWMKNRPAIKLKTE NT seq 2811 nt NT seq  +upstreamnt  +downstreamnt atggcgtttccacctcgttttgggatgccttctattgctcaggctacatttgttccaact tataatgctgttccagttgttctgccaacaactgctcattatttaatgccaacgcttgcc aacagtggtgtcgttcgaaatgttgttcagaaaacaccttcaccagctccactgacaaaa cgacaagagatactgatggaaaagcctcccgtgacaactgtttttgtgggaaatatcaac gagcaggccaccaacgaaatgatcaaagcaatgctagtgaaatgcggtaatataattagc tggaaaagaattcagggaccgaatggaaagtttcaagcatttgggttctgcgagtatgat catccagattcaacattgagagcgctgcgactactgcacgattggcctttaggagataaa aagttggtgcttaaatgtgacgaaaaaaataaatctatgctaattgacttcattaacaaa cgaagaagcttgtacaataagccaccgttgaagatggaaggagatcagttaccagcagat gatgaaattcgaaaagaagatgaaatgtttcgaaaggcattaaaaaatttggtcaaagaa atggcacctgagcttttcgaaggaacatcaaaatctcacgttccgaaatctcctactctt actggcaaaggaggaaatttggatatcgaaagtttggatcgtgatcgtaaagaatatatt gcaaaagaaattattcagtttcgtgaagcccataaagtatctttttgtttttgggtgcaa tatttagcgacaacactaatgttgtatcttagatattcattttgttacattttgcattgt gcacatcatagcctgccagtaatagcgacgagctttttcttcgccgaatttttacgcgag aatggaattcgacgagtgctgaactgtacagattacgatgataaagaagcacgtttgaag ggaaaatcagcttctgttgatgtgaatgaaaagaacgagcgttttactgaaagaccatct actcctttggaagctgacagacgagcgtctacaaaattcgaacgaaactgtgctaccgat agtgccgatgcaaaagttggtgaagccagagggcgtaggcggggtagcactcctgaaact ggaagccgtcgaagacgatctccctctgctgacaggttgttggaaaccagtgaagatgca cgggaaagagaaaaattggaacgcaaagccagggaaaaggaaaagaattatttggaaaga ttagaaaaattagaagccagagaaaaaagaaaagcgaaagaacggctcaaacaagcggaa aaggaaaaaaggcgaaaaaaagaacaattagcagatattaaaattatgcaagagttcctt gaagactacattgatgaagagggtgatttggaattttatcagggcaaatcattactgcta agaaaagatgcaattacagacgagatggaatgggatgcacttgacagacttcgcgaagca gaagaaattgctttaattcgtcgtaagcttattgaggaaaattcaagtaaagattctaat gagacaaaaataatggtggaagaattacctgtgaatcctgtgaaattggaagagcagcag cgtaccgtttcagaatctgaaacggataaagctgctgataataatgataataatgcagat gaagtggattccgctgtcccaaaggtgaaaaaagagacggttctgattccaactgttttt ttacccgcacaagcagaaaacagtcagcccattggttttgctggcttgaagctaggctct gtttctacatcgacgaatactgcagcgcctataccattgcagcagatgtttaatgaaccg gatgaagaattttcagttgttaaaacgtcttctcgaaaattggtaccattggagtacact gaggaagagaagcgtgctctggaaatgccgaacatgcatactcagatgtctactgaagag cgtaagaaatatgtgaaaagtctcattgacaagatccccagttctaaagaagaacttttc aagtatgaaattcattgggaatacgtcgatcagcttttgatcgatcgtcgaataaaaccg tggatcagtaagaaaataattgagtacattggggaagaagaagccagtttggtagatttt atatctgaaaaggttcttgaaagatcaacaccacagggtttgttagatgatatttcaatg gtattggatgaagaggctggagtttttgtggccaaactgtggcggttgcttatttatgaa atagaagctaaacgaaaacaaacatgcggaatctttattttaacggttttgattcgacac ttttttgtttccgatttgcacaatgtggaactgccattaaatttcatttttgaaacttgt gagaagtatggtgtatgctcttatcctgttgcaaatgtatcgctgcagaacagaaacggc cagtcgttatttgaggttgatttttattacgatgtcttgttcgaattgaccgtatttcct gactctgtcaggcccacttctggcatgattatgcttattgttcgatgttacagtggtgaa aatttgctcacttacagctttccgagaagcacaatactgatttatcgcccgtggccatgg cggttgattagaattggagctgcaaaatacagaaatgaatattgttcgctcgtcaattat tctgcagccgtgcttaaagtaaccgaaatccagcatcccacttacaaagagaatattgct ttttcattttggatgaaaaatcgaccggcaataaaattaaagacagagtga

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