Trichinella spiralis: Tsp_03427
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Entry
Tsp_03427 CDS
T01609
Name
(RefSeq) protein SDA1-like protein
KO
K14856
protein SDA1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_03427
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Tsp_03427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
SPATA6
Motif
Other DBs
NCBI-GeneID:
10909413
NCBI-ProteinID:
XP_003379775
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MSVCDFMHSVNSLLGGIVGTMPSDKMRQNLSILQEQLVRDPASYRDEFIEQYRHFESLLS
LAEMQPQVKSERLLEIVFFLCHSAHFYKDVAHSFAQQLVDTISRSAQTVQPALRLGICKA
LLLLHGKRMLTLPDLVNTFLDLLKCRDKTLRRFLYTATISRVKRLNAKRRDPKVNSTLQA
ILMQRANRSSAIVARFCLLILTELFRRRIWFNENVANAIAEGCFSGTTKIAVASMMFMLG
SDVTYNDALQEMMFTNRVCKKSKKRARLIEKAKAELRKRRAKQSRAARADHLNSAAILML
RDAQDFAERLYHRLITGRDRFEVRLLRMALISRLIMTHRLLLLNFYPFLHRYLNPKQRDI
TKILLFAAHASHDLVPPDVIGVLVRVIAQNFITDRNSSEAIAVGLNAIREVVANCPLAIS
DELMRDLSEYKKYKNKNVQVGARSLIHLFRRINPKALAKRDRGRRTAVVNDDYSGEDDHR
LAAPYGASDAVTCVQGAECLLVDHGNMNHNPAIDQKTAKSKMKNQPCDIMDSDTCDSDSD
DCHMENDDDTSGTEEGALSALKKAEIVSGSRILSDNDFEKIAAAQAIKEVLPPSKKKQLS
DLQIESIDHKNRPAKLADIEFLVKKPKQDRQARKASAEAGRDAGRYTKQKSKGTHVGRNK
KQVAKLKAFPMVKHKSALKRKNRSFRQQQQALRQYLIKQSKMY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttgtgattttatgcattctgttaatagtcttttaggtggaatagttggaaca
atgccaagtgataaaatgcggcagaatttgtctattctacaagaacaactggttcgtgat
ccggcatcttacagggatgaatttattgaacagtatcgtcatttcgagagtttgttgtcg
ttggctgaaatgcagcctcaggtgaaatcagaacgcctgttggagattgtatttttcctt
tgtcattcggctcatttttacaaagatgttgctcattcgtttgctcaacagctcgtggat
acgatatctcgcagtgctcagactgtacagccggctctgaggttgggtatttgcaaagct
ctgcttttgctgcacggaaaacgtatgctgacactgccagatttggtgaatacatttttg
gatttgttgaagtgtcgggacaagacattgcggcgttttttgtacacggccacgataagc
agagtgaagcgactgaacgccaaacgtcgtgatccgaaagtgaacagtactttgcaggca
attctcatgcaacgagcgaatcgttcaagcgccattgtcgccagattttgtctgctaatt
ttgaccgaattgttcagaaggcgaatatggtttaatgaaaacgtggccaacgccattgcc
gaaggctgtttcagtggtacgacgaaaatagcagtggcgtcgatgatgttcatgctcggt
tcggatgtgacttacaatgatgcattgcaagagatgatgttcaccaatcgtgtgtgcaaa
aagtcgaaaaagcgagctcgattgatcgaaaaggcgaaagctgagctgcgcaagagacga
gccaaacagtccagagctgctcgtgcggatcatttgaattcggctgcaattttgatgcta
cgcgatgcgcaagattttgccgaacggctttatcaccgtttgatcactggccgcgatcgt
ttcgaagtacgccttttgcgtatggctctgatcagccgcttgattatgactcatcgattg
ctgttgctcaacttttatccattcttgcaccgctacctcaatcccaagcagcgggatatt
acgaaaattttactattcgccgctcacgcatcccacgacctcgtgccgccggacgtgata
ggtgttttggttcgtgtgattgcgcagaatttcatcaccgacagaaacagcagcgaagct
atagcggtcggcttgaacgccatccgtgaggtggtggccaattgcccgctggctatatcc
gacgaattgatgcgcgatttgtccgaatacaaaaagtacaagaacaaaaatgtccaagtc
ggtgccagatctttgatacatctttttcggcgcataaatccaaaagctttggccaaacgt
gaccgaggtaggcgaactgccgtagtgaacgacgactacagtggcgaagacgatcatcga
ctagctgctccatacggagcaagcgatgctgtgacctgtgttcaaggagctgaatgtttg
cttgtcgatcatggcaacatgaaccacaaccccgctatcgatcagaaaactgcaaaatca
aaaatgaaaaaccaaccatgcgatattatggacagtgacacctgcgatagtgacagtgat
gattgtcatatggagaacgacgatgatacaagtggaacagaggaaggggcattgtctgca
ttgaagaaagctgaaattgtatctggtagcagaattttgagtgacaacgattttgaaaaa
attgccgccgctcaagcaataaaagaagtgctgccaccgtctaagaaaaagcagttatcc
gatttacaaattgaaagcattgatcacaaaaatcgaccggcaaagcttgccgatattgaa
tttttggtgaaaaagccgaaacaggatcggcaagcgagaaaagcttctgctgaagcgggt
cgtgatgcgggcaggtataccaagcagaagtcaaagggaactcacgtgggtcgtaataag
aagcaagtggcgaaactgaaagcttttcctatggtgaagcataaatcagctttgaaaagg
aagaaccgttccttcaggcaacaacaacaagcactacggcaatatttgattaagcagagt
aaaatgtattga
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