Trichinella spiralis: Tsp_03481
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Entry
Tsp_03481 CDS
T01609
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_03481
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Tsp_03481
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tsp_03481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
10909468
NCBI-ProteinID:
XP_003379830
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MKITTWNVNGLRSIVDIQKTLLSLGCDIICLQETKLTYDTLDSSLALIDGFDSYFAFCQT
RRGYSGVATYCKSDFSPDLVFNNFHDLYRQFQFAHPNRQHLGIFDNFDTLDNEGRMLATR
HKLTNCNNAEYLFILNIYCPRVDPEQMDRQNFRLAFLKLLQHCTECLLNSGNYVLILGDM
NLCHKRIDHCDPDQEFDTDEARIWLCEFLYDTDKNADGKMVDLYRIHYPNKGRMFTCWNS
QKRARILNFGTRIDYILANVDLIDRCSCCEILSSIQGSDHCPVMAELSTTISAADVQLPL
SSRKRFSSVGTQLSLWKFFKTNNSTIREPEETDDRLVLLKKRRKISKCLTLKDFWSTKDN
AQPTVSSGSSSVTVEEREVDRDGLVDQLDEEEKLSRVENWKKLFGGTSTFRQAPLCKGHG
ESGQIKFFFSLLVINRMVMFENTTEYCIVQYTFYDRKEIIIG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacgacctggaatgtcaatggcctacggtcaatagtggatattcagaagacg
ttgttgtcacttggttgtgatataatttgtttacaagagaccaaactcacctatgacacg
ttggattcgagtttggcactgatcgacggcttcgatagttattttgctttttgccaaacg
agacgtggctattcgggtgtggcaacttattgcaaaagtgacttttcaccggatttggtg
ttcaacaatttccacgatttgtatcgacaattccaattcgcccatccaaatcgacaacat
ctgggtatttttgataatttcgatacgttagacaacgaagggcgtatgcttgcgactcgt
cacaaattgaccaattgtaataatgccgaatatcttttcattttgaatatctattgtcca
agggtcgatccggaacagatggatcgtcaaaattttcgcctagcttttctgaaattgttg
caacattgtacagaatgtctgttgaacagtggaaattatgtactaattttgggcgacatg
aatttgtgccacaagcgtattgaccactgcgatccggaccaagaattcgacacggacgaa
gcgagaatatggttgtgcgaatttttgtacgacaccgataaaaatgccgacggaaaaatg
gtcgacctgtaccgtatccattatccgaacaaggggagaatgttcacttgttggaacagt
cagaaacgggcgcgaattttgaatttcggcacgcgcatcgactacatcctcgccaatgtt
gatctaattgatcggtgcagttgttgtgaaattttatcatcaattcaaggatccgaccat
tgtccagtgatggcagaattgtcgaccacgatctcagccgccgacgtccaactaccattg
agctctagaaaacgcttcagctcggttggaactcagctatcgctgtggaagtttttcaaa
accaacaattctacaattcgtgaaccggaagaaaccgacgatcgactagtgttgttgaaa
aagcgaagaaaaatttccaaatgtttaacgttgaaagatttctggtcgacaaaagacaac
gcccaacctacagtaagcagtggatcgtcgtcggtcacggtagaagaacgtgaagtggac
agggatggtctagttgaccagttggacgaggaagagaaattgagtcgcgttgaaaattgg
aaaaagctattcggtggaacgtcaacgtttcggcaagcgcctctttgcaaaggacacggc
gaaagtgggcagattaaattttttttttcattacttgtcattaatcgaatggtcatgttc
gaaaacacaactgaatactgtatagtacagtacactttttacgatcgaaaagaaattatt
attggataa
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