Trichinella spiralis: Tsp_03554
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Entry
Tsp_03554 CDS
T01609
Name
(RefSeq) putative CCAAT/enhancer-binding protein zeta
KO
K14832
ribosome biogenesis protein MAK21
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_03554
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Tsp_03554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBF
PvuRts1I-like_N
FAM176
Motif
Other DBs
NCBI-GeneID:
10909786
NCBI-ProteinID:
XP_003379905
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MNSVASGGTLSDRVAALGMLVQQSPLHNLKHLDTLLNKVTKKNRHEALIAADVAKDLFIE
ELLPDRKLIPFKSRPYVEIENTKGQSKAAVDRKLLLWQFESELKMKYQQFLHAVEQLCHD
TVEAVRLKGCILLVDLLIAKAEQEQFILSSLVNKLGDQSVKVATQVVKLIGRLFVAHPNM
KVVVVDELEKLIYRKNITPCAQFYAICALLKVPLNRNNDEDLACKILNVYFDLFKIVIQS
DVENQRLLRHLLLGTNVAFSYSKGKFDRISEEVDTLYKIAATSSLYINLQALALLFQVLD
VKAEISDRFYRSLYRTMLVPELLSSSRCHAMFFHLLFKSMSQDFSDQRIRAFVKRLLQVC
LMAPAPFICAALLVISQALHGRLKRFIAITDQWVEDDHEEQEKVDDEEEKEIGNGKKKQT
PTESNNTNDNKQNANNIYGNVYGSREYNIAGREPLHANADRESLVELLLLRNHYHPTVAV
FAENLLKGNHINYSGNPLDDFSLMHFLDRFVFKNPKKSISENVEEKNTEKRGYKRKIYDP
WSLRSLPVTSSAYALHHKSHVPPDEKYLHSFMTNANVKRAEEQLSEESDIESVNSEDEIG
NKRRRRRRRRSKRSEDSDDSDNPSDSSGDESDFEAGRSKLNTAALTGDNDDSTDGGVLDD
DDATTAAEEVQFEITCNVVYASDAFGEILENDDEEDEKKKHDRKRKAYKKFQKVRQRRRR
RLNGSNGSAFSSRILDALKFLSFTLSKVMLKMMMVQLEGMHSVGNERNLYFFIVVAAAKN
FH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggtcgcctctggcggtacgttgtcggacagagtagccgctttgggtatgctt
gtccaacagtcgccgttgcacaatttgaaacatctcgacacgctgttgaataaagtgacc
aaaaagaaccgtcacgaagctttaatagctgcagacgtagccaaagatttgtttattgag
gaacttttaccagatcgtaaattgatcccgttcaaatcgaggccttacgttgaaattgaa
aatacaaaaggacaaagcaaagctgccgttgaccgtaagctgttgctttggcaatttgaa
tctgaactgaaaatgaaatatcaacaatttttgcacgcagttgagcaattgtgccacgat
acagtagaggcagttcggttgaagggttgcatattgcttgtcgatttattgattgccaaa
gctgaacaagaacagtttatactttcatctttggtgaacaaattgggcgatcagagcgtc
aaagtggctactcaagttgtcaagttgatcggtcgcttgtttgttgcacatccaaatatg
aaagttgttgtcgtggacgagttggagaaactcatttacagaaaaaatatcactccttgt
gcacaattttacgctatatgtgcactgttgaaagttcctttgaacagaaataatgacgaa
gatttggcttgcaaaattttgaacgtttactttgatctgtttaaaattgttattcaaagc
gacgtggaaaatcagcgtcttctccggcatcttttgctcggtacaaacgtggcattttcc
tactcgaaaggaaagtttgatcgaatttcagaagaagtagacactttgtataaaattgca
gcaacgtcatcgctgtacataaatcttcaagctttggctttgctttttcaagtgttggat
gttaaagctgaaatttcagatcgcttttatcgatcattgtatcgtacaatgcttgttcca
gaattgctgtcgtcttcacgatgtcacgctatgttttttcatcttttgttcaagtcgatg
agtcaagattttagtgatcaacgaatacgggcatttgtcaagagactgttgcaagtttgt
cttatggcaccggctccatttatctgtgcagcgttgctagtaatatcgcaagcattgcat
ggacgattgaagcgttttattgcaataactgatcagtgggttgaagatgatcatgaagaa
caagaaaaagtagatgatgaagaagaaaaagaaattggaaatggaaaaaaaaagcaaacg
ccgaccgaatccaacaacactaatgataataagcaaaacgcgaataacatatatggtaat
gtttatggttctcgtgaatataacattgctggtcgtgaacctttgcatgcaaatgcggac
agagaatcgttagttgagttgctgttgctcaggaatcactatcatccaactgtagctgta
tttgcggaaaacctattgaaaggtaatcatataaattattccggcaatccgttggatgat
tttagcttgatgcattttctcgacagatttgtattcaaaaatccaaagaaatctatttct
gaaaatgtcgaagaaaagaacactgagaaacgtggttataagcgaaaaatttatgatcct
tggagtttgagatcattacctgttacatcatctgcatatgcattgcatcacaagagccat
gttccaccagatgagaaatatttgcacagctttatgactaatgcaaatgtgaaaagagct
gaagaacagttgtccgaagaatccgacattgagagcgtgaatagcgaggatgaaattgga
aacaaacgacgacgacgacgacgacggcggtcgaaacgctctgaagattctgatgattct
gataatccatcagattcttctggagatgaatccgattttgaagcgggtcgatcaaagctt
aatactgcagcccttacaggtgacaatgatgatagtactgacggcggcgtactggatgat
gatgatgcaacaactgctgcggaagaggtacaatttgaaatcacctgcaacgttgtatat
gcaagtgatgccttcggtgaaatcttggaaaatgacgatgaagaagatgagaagaaaaag
cacgaccgtaaacgaaaagcgtacaagaaatttcaaaaagttcgtcaacgacgacggcgt
cgactaaatggcagtaatggttcagcttttagtagcaggattttggatgctttgaaattt
ctctctttcactttatccaaagtcatgctgaagatgatgatggtccagctagaggggatg
cattcagttggtaatgagcggaatctatatttttttattgttgttgctgcagctaagaat
ttccattga
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