Trichinella spiralis: Tsp_03593
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Entry
Tsp_03593 CDS
T01609
Name
(RefSeq) dystroglycan
KO
K06265
dystroglycan 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04512
ECM-receptor interaction
tsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03268 Virion - Orthopoxvirus
Tsp_03593
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
Tsp_03593
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Tsp_03593
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAG1
zf-rbx1
zf-ANAPC11
He_PIG
TMEM154
PspB
DUF5305
OPA3
Motif
Other DBs
NCBI-GeneID:
10910068
NCBI-ProteinID:
XP_003379944
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MALLLFLFLLVAVLATSSHAQYGLPDAVASVGRLFNYDLPNLDPATKFHQFSEIGGDGLP
LWLEWDKKESTLAGVPMVNDNGPMYIAVKFANGSRDVFAIDVRDPDEPCDSTTTGTVERV
YAVLPMDVNLDQLLPAERVLLMKLANRRWSTVVRTGQLTLGNWRLFKTAQRIWSNADPLK
PDLSIQDSEAVFYWTVACQMPLKANETKLIAQLAQQTQNTPTEKMQFLLPDFNKKITIKG
LLLVKWEISNLRTKRQFDDDYSRYLASRFGHARFTTELYPQTTTTRRPFTFPPRRPPVQS
IRPTSRIDYGSTTATTTSPTPSRFTATLRPVTTDRESPKIEVHLTRTTPTVTTSPFKLDE
NSRPKVQKSLGTVVCYKGVVCEVRIPDDTFYDREDGSTVMLELSLTALDGGNKSHSDWIY
LDKLDRTLYGLNLNTGQWQYSLTATDSAGSAVSDAFAIQVVEPSHETDHAHYNHHFTVTL
SEQLDKLSVHPTTLVKLVSKLAEFFGDLSPSAIVVRSLKSGSTVLEWSNGTLFDSACPRS
DIGKLTSKMRRKGGGVKSDFYRFMKPEFTVTDVDVAFHGACSDDASRMKSDDEKEEEEPE
EGGNALMSTVLPAIIIIVLLVIAGVIACLYYRRSRSTAKKHEEVEKKFLSKGTPIIFPDE
VDGDEECTATSPMLLKEDKPPTPMTELSSFQPTSLNGSSTPKSTKANNSTNSYAEITTAT
MWSWDILVDSCAVCRNSLMECCTECQAAQKYTENVDCVIAWGVCNWNAVAMWSWDISVEN
CAVCRNHIMELCIECQAAQQSVNTAECTVAWGVCNVCTIFIIHFIVLILFKCLLSLNV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgttgttgttcttgttcttgttagtagcagtattagcaacttctagccacgcc
cagtatggtttgccggatgcggttgccagtgtgggacgtttgttcaactatgatctacct
aatttggatcccgctacgaaatttcatcagttttccgaaattggtggcgatggtttgcca
ctgtggctcgaatgggacaaaaaagaaagcacgttggccggtgtgccgatggtcaacgac
aacgggccgatgtatatagcggtgaaatttgccaacggctcgcgggatgttttcgccatt
gacgttcgcgatccggacgagccgtgcgattcgaccaccaccggcacagttgaacgcgtc
tacgcggttttgccgatggatgtgaacctggatcaactgttgccagccgagcgtgtgctt
ctgatgaaattggccaacaggcgttggtcaacagttgtccgaactggtcagttgacgttg
ggtaattggcgacttttcaaaactgcccaacggatctggtcgaatgccgacccattgaag
cccgacttgtcgattcaagattccgaagcagttttctactggacggtcgcttgccagatg
ccgttgaaagcgaacgaaacgaaactgatcgctcaacttgcccaacagacccaaaatacc
ccgacggaaaagatgcaatttctgttgccggattttaacaaaaaaatcaccatcaaaggc
ttgctgctggtcaagtgggaaatttcgaatttgagaaccaaacgccaatttgacgacgat
tattctcgttatttggcttcacgttttggtcacgcacgtttcactactgaactttatcca
caaactacaacgactcgaagaccatttacatttccaccccggagacctccagtccaaagc
attcgaccaacatccagaattgattatggctcgaccacggcaacgaccacatctcccacg
cccagtcgatttactgctactcttcggccagtgacgacggatcgtgaatctccgaaaatt
gaagtccatcttacacgtacaactccaaccgttactacgtcgcctttcaaattggatgaa
aacagcagaccgaaagtccaaaagagtttaggtacggttgtctgttacaaaggagttgta
tgcgaagtacgcattccggatgacacgttctacgatcgcgaagatggtagtactgtcatg
ttggaattgtcattgacagctttggatggtggtaacaaaagtcattcggattggatctat
ttggataaattggaccgaacgttgtatggattgaatttgaacaccggccaatggcagtat
tcactgacggcaactgacagtgcaggcagtgcagtgtcggatgcgtttgccatacaagtt
gtggaaccaagtcacgaaactgaccatgcccattataatcatcatttcacagtcactttg
tctgaacaactggacaagctaagtgtgcatccaacaactttggtgaaattggtgtcgaag
cttgcggaattttttggcgatttaagtccgagtgcgattgtggttcgctctctgaagtcc
ggttcaacggtgctcgaatggagcaatggcactttgttcgattcagcgtgtccacgttcg
gatattggcaagttgacgtcaaaaatgcgacgcaaaggtggtggtgtgaagagcgatttt
tatcgctttatgaaacctgaatttaccgtaactgatgttgatgtcgcttttcacggagcc
tgctcggatgatgcaagtcgaatgaaatccgatgatgaaaaagaagaggaagagcctgaa
gaaggcggaaacgcgttgatgtcgaccgtgttgccggcgatcattattattgtattgttg
gtgattgctggcgtgattgcctgcttgtactacagaagaagcagatcgacggccaaaaag
cacgaagaagtggagaagaagttcttgtccaaaggtacaccgataattttccctgacgag
gtggacggtgacgaggagtgcacagccacgtcgccgatgttgctcaaagaggacaagccc
ccgacgccgatgaccgaactcagctcgtttcagccgaccagcttgaacggttcctcgacc
ccgaaatcgaccaaggctaacaacagcaccaacagctatgccgagataaccactgctaca
atgtggtcatgggacatattggtggacagttgtgctgtatgtcgaaatagcttaatggag
tgctgtactgaatgccaggcagcgcagaagtatactgaaaatgtggattgcgtcattgct
tggggagtctgcaattggaatgctgttgctatgtggtcatgggacatatctgtagaaaat
tgtgcggtttgtcgcaatcatattatggaactctgtatagaatgtcaagctgcacagcaa
tcagtcaatactgcggagtgtactgttgcttggggagtgtgcaacgtatgtactattttt
attatacattttattgttttaattctatttaaatgtctactttcacttaacgtatga
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