Trichinella spiralis: Tsp_03656
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Entry
Tsp_03656 CDS
T01609
Name
(RefSeq) eukaryotic translation initiation factor 2C 2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tsp
Trichinella spiralis
Pathway
tsp04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
Tsp_03656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_03656
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03656
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Tsp_03656
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Tsp_03656
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Tsp_03656
microRNA pathway
RISC loading complex
Tsp_03656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
10910164
NCBI-ProteinID:
XP_003374460
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MQFGGLFGQPAVGLGGPLSMAPIGQPPIGAPLSVVSSENPIGLAQRSTSLSISSHSSITG
PPGSSDSIAVFLAPRRPNHGIEGRPIGLRANHFQVRIPGGFIHHYDVSISPEKCPRRVNR
EIINTMVRAYSRIFNMLRPVYDGKKNMYTREPLPIGKDKIELDVTLPGDSTVERKFHVTI
KWVTQVSLSMLEEAMEGRIRTVPYESVLAIDVILRHLPSLRYTPVGRSFFTPPQTYSESK
LGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIEFLAEVLDLPMQALAERRSL
SDAQRVKFTKEIKGLKCEITHCGTMRRKYRVCNVTRRPAQTQTFPLQLESGQTVECTVAK
YFFDKYHIQLKYPHLPCLQVGQENKHTYLPPEVCNIVPGQRCIKKLTDTQTSTMIRATAR
SAPEREREISTLVRKADFNGDPYAHEFGIAINPAMTEVKGRVLSAPKLLYGGRTKATAVP
NQGVWDMRGKQFHTGVEIKIWAIACFAQQQHVKENDLRNFTQQLLRISNDAGMPVVGQPC
FCKYATGVDQVEPMFKYLKQTFHGIQLIVIVLPGKTPVYAEVKRVGDTILGIATQCVQAK
NVVKTTPQTLSNLCLKINVKLGGVNSILLPSIRPRIFNEPIIFMGADITHPPAGDSKKPS
ISAVVGSMDAHPSRYAATVRIQQHRQEIITDLANMVKELLIQFYRSTRFKPTRILLYRDG
VSEGQFFNVLQHELRAMREACMMLERGYQPGITFIAVQKRHHTRLFAVEKKDQVGKAFNI
PPGTTVDVGITHPTEFDFFLCSHAGIQGTSRPSHYHVLWDDNSLTADELQQLTYQLCHTY
VRCTRSVSIPAPAYYAHLVAFRARYHLVDRDHDSGEGSQPSGTSEETTMSSMARAVQVHP
DANSVMYFA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggtggtctgtttggccaaccagccgttggtttgggtggtccgttaagtatg
gctcccattggtcaaccgccaattggtgcgcctttgagtgttgtttcgtctgaaaatcct
attggccttgcgcaaagatccacttcactgtccattagctcgcattcttctattactgga
ccacctggaagtagcgatagtatagcagttttcttggccccaaggcgacctaaccatggc
attgaaggacgcccaattggactcagagctaaccattttcaagtgcgaattccaggtggt
tttattcatcattatgacgttagcatctctcctgaaaaatgtccacggcgagttaacagg
gaaatcattaacacaatggttagggcatattcccgtatttttaacatgttgagaccggtg
tacgatggtaagaagaacatgtatacaagagaaccgttaccaattggtaaagacaaaatt
gaacttgatgttactttgcctggcgattcaactgttgaacgtaaatttcatgtgacaata
aaatgggtgacacaagtaagtctgtcgatgttagaagaagcgatggaaggcagaattcga
acagttccatatgaatcagtgcttgccattgacgtaattttgcgtcatttgcccagttta
aggtatacgccagtggggcgttcattttttacaccacctcagacgtactccgagagcaaa
cttggtggcggtcgggaagtttggtttggctttcaccaaagtgtgcggccgtcgcagtgg
aaaatgatgctcaacattgatgtgtccgcaaccgctttctatcgttccatgcctgtaata
gagttcctggctgaggtactcgacctgccaatgcaagctttagctgaacgtcgttcattg
tctgacgctcagcgcgtaaaatttaccaaggaaatcaaaggccttaaatgtgaaattaca
cattgcggcactatgcgaaggaagtatcgcgtttgcaatgtcactcggcgacctgctcaa
actcaaacgtttccattgcaacttgaaagcggccaaaccgtcgagtgcacagtggccaaa
tatttttttgacaaatatcacattcagctaaagtatccgcacttgccatgccttcaagtt
gggcaggaaaacaagcatacgtacctgcctcccgaagtctgcaacatagtgcctggtcaa
cggtgtatcaaaaagcttactgatacgcagacgtcgactatgattcgtgcaactgcccgt
tcagcacctgaaagagaaagggaaatatcaacgctggtacgaaaagcagattttaatggt
gatccatacgcgcacgaatttggaattgccatcaatcctgcaatgacagaagttaaaggt
cgcgtattatcagcaccaaaattgttatacggtggtagaaccaaagctacagcagtacca
aatcaaggtgtatgggacatgcgcggcaagcagtttcacacgggcgtagaaataaaaatt
tgggcaattgcctgttttgctcaacagcagcatgttaaagaaaatgatcttagaaacttt
actcaacagttgcttcgaatttctaatgacgctggcatgccagtagtcggacagccatgt
ttctgcaaatacgctactggcgtcgatcaagttgaaccgatgttcaaatatctcaaacaa
acatttcacggcatacagttgattgtaattgtcttgccaggaaaaacacccgtttatgct
gaagtgaagcgtgttggtgatacaatcttgggcattgctacacaatgtgtgcaagcaaaa
aacgttgtgaaaactactcctcaaacactgtcaaacttatgtttgaaaattaacgtgaag
ttgggtggcgtaaatagcatccttttaccgagcattagaccacgcattttcaatgaacct
attatatttatgggtgcggatataacgcatccgcctgctggggatagcaagaagccgtct
atttcagctgtggtaggaagtatggatgctcatccttcacgctacgcagctactgtacgt
attcaacagcatcgtcaagaaattattacagatttggcaaatatggtgaaagagttgctt
atacagttttacagaagtaccagattcaaaccaactcgaatattgctttatcgagatggt
gtgtcagaaggccagttttttaatgttttgcagcatgaacttcgtgcgatgcgcgaagct
tgcatgatgttggaacgtggctatcaaccaggtataacttttattgcagttcaaaaacga
catcatacaaggttgtttgccgtagaaaagaaagatcaagttggcaaggcattcaacatt
ccacctggtacaacggttgacgttggcattacacatcctacggaatttgatttttttctt
tgcagccatgctggcattcaaggtacaagtagacccagtcattatcatgtgctttgggac
gacaatagtttaaccgcagatgaactgcagcagttgacttatcagctgtgccacacttat
gttcgctgtacccggagcgttagcattccggcgccggcttattatgcgcatcttgtcgct
tttcgagctcgttaccatctagttgaccgtgatcatgatagcggtgaaggcagtcagcca
tccggtacgagcgaagagacaacaatgagtagcatggctagagctgttcaagtacatccg
gatgcaaattcggtcatgtactttgcttag
DBGET
integrated database retrieval system
