Trichinella spiralis: Tsp_03661
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Entry
Tsp_03661 CDS
T01609
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tsp
Trichinella spiralis
Pathway
tsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tsp_03661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_03661
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Tsp_03661
Prokaryotic type
Archaeal type
TFE
Tsp_03661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
10910169
NCBI-ProteinID:
XP_003374465
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MLIRNVSMREEELRDLLKFDPKQLRVFLLSLKTDKIIKERQELEPRPEGRPLRFNYYYIC
YPSFITMIKYKLENMRKRLESQQKSVTNRSSFKCTSCDKLYSDLDINLIWNGENMKCIFC
YSIVEENELPTEVELSRSGLAKFNEQLWPVFEILRSLQGVQLARHLLEPEPPSKLRQARE
NSSKRVDLTARQRGFEIGSSSTETPNTLIITDSKAGSKVVQKEIPAWLQNSTIRGSAAGL
PDISAGQQNASVQHVDRGDDIVKKLLVHESRSNFSFPSSSSFSAFAVQDKTDANDEDSDD
EFVEEEEELKVTVQGRPITLEELMSNPSLVNTMTEEEKQNYVRITQQAFSNYYVD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcgcaatgtgagtatgcgagaagaagaattgagagatttgttaaagtttgat
ccaaaacaattaagagtatttttgctttctttgaaaaccgacaaaataataaaagaacgc
caagaattggaacctcgtccagaaggtcgtccattacgatttaactactattacatttgc
tatccatcttttattacaatgattaagtacaagttggagaatatgagaaagcgtttagaa
tctcaacaaaaatctgttaccaatcgttcttcgtttaaatgtacatcttgcgacaaactt
tattccgacttagatattaatttaatttggaacggggagaatatgaaatgcattttctgt
tacagtatcgtagaagagaatgagcttccaacagaagtagaattatcaagatctggtctg
gcgaaatttaatgaacaactttggcctgtgtttgagattttgcgatcgctgcaaggtgtt
caattggcacgtcatttgctagagccagaaccaccatcgaagctgcgccaagcgcgggaa
aattcatctaaacgcgtagatttaactgcacgacagcggggctttgaaattggttctagc
agtacagaaacgccgaacacactaatcattacggacagcaaagcagggtcgaaagtagtt
cagaaagaaataccagcgtggttgcaaaacagtaccattcgtggttcagcagctggttta
ccagatatcagcgccggacaacagaacgcatcagttcagcatgtggatcgtggcgatgat
attgtgaaaaaactattagtgcatgaaagtagaagcaacttttcctttccttccagttca
tctttttctgcgtttgctgttcaagacaaaacggatgctaacgatgaggacagtgatgac
gaattcgttgaggaagaggaggaactgaaggttactgtacaaggtagaccaattacatta
gaagaattgatgagtaatccttcactggtaaacaccatgactgaagaagagaaacaaaat
tatgttcgcattacgcagcaagcgttcagcaactattacgtcgattaa
DBGET
integrated database retrieval system
