Trichinella spiralis: Tsp_03678
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Entry
Tsp_03678 CDS
T01609
Name
(RefSeq) putative RNA recognition motif protein
KO
K12897
transformer-2 protein
Organism
tsp
Trichinella spiralis
Pathway
tsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tsp_03678
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_03678
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_03678
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Tsp_03678
Spliceosome [BR:
tsp03041
]
Common components
Common spliceosomal components
SR proteins
Tsp_03678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
FMP27-BLTP2_C
CDC45
DUF4363
Motif
Other DBs
NCBI-GeneID:
10910147
NCBI-ProteinID:
XP_003374482
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MGDYNSDSEPEREYSEERRTSRVKEESSNRSRRRSRSASRSRSRSRSRGKRRGRSSSRSA
SRSRSRSGERNSSSRVHIGDIDDTITKADLEDAFSKFGKISEIWLATYAPFYAFIVYKTR
EDAEEAVHRLNGSYIRNCKVRVSLALPRRRYGPRSDWRPPPRGYSMRRNYDYGSGYYDSY
DRRDYYDRRYEPRSSYRRTRSPYYDRYDRYSRSP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggagattataacagtgacagtgagcctgagcgtgaatatagtgaagaaagacggaca
agtcgtgtaaaggaagaatcttccaatcgttctcggcgtcgttctcgttcggctagccgg
agtcgtagtcgtagccgttcacgtggcaagcgtcgtggtcgcagcagctcgcgctcggct
tcgcgcagtagaagccgttctggcgagcgtaacagcagttctcgcgttcatattggggat
attgatgatacgattacaaaagcagatttagaagacgcttttagcaaatttgggaaaata
tccgaaatttggcttgcaacgtatgcaccattttacgcttttattgtgtacaagactcgt
gaagatgcagaggaagcggttcatcgattgaatggcagttacattcgaaactgtaaagtt
cgagttagtttggccctaccacgtcgtcgttatggtccaaggtctgactggcgtccacca
ccgcgtggctatagtatgcgtcgtaattatgattatggtagtggttattatgattcatac
gatcgtcgagattactatgatcgtcgatacgagcctcgcagcagttacagacgaactcgt
tctccatactatgaccgttatgatcgctacagccgcagcccatga
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