Trichinella spiralis: Tsp_03712
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Entry
Tsp_03712 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K14289
exportin-5
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_03712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_03712
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03712
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Tsp_03712
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
Tsp_03712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xpo1
AAA_24
Motif
Other DBs
NCBI-GeneID:
10910195
NCBI-ProteinID:
XP_003374516
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MSAILMFQVQIISKLLQILIFLLRISVLQQGICYEQFFGERTETLDLWLTAEIVCLVRMN
ENLPVTGDILPDLISAIECNFQPGTDYNMRSASYMLIESVKESNQCLEIGFRMLDICFSI
YVQQCGLQFILHAIRTKWPSLPPVVQQLSKDRLINCLLSSPANNDIRSTPAIMEGFAQCI
VAIVECDWPQKWKSFIEDCRSISKIGPSQAIVVLSVIGRLIEDVMEFELIEDPSRNKELR
TVVLDSASEFFDLTLEMIKQSKAGEIPPSCAESSVRQRMLEKSYHLLNSLIASLNPRPHL
FTKFVDKILEPARDAFKSGNIPVAEIAISCLESVFPRKASAKNYKPVVIFFKSGRLNFAY
DFIMMTSLLPFDQQNYALLKAATHLFFDIATCFCSFWVGCFELFEIEDCIDNWDSIFRLM
LSLLKHPSTYCRMWCSLIFNSMKNCKKVYKIERFAPILTELFEYIPKATLKNGEPSKAVE
PFSAYAKFDYETNTAFSIDYHRKFCLLFPCAFARSETLVVDSGLREACEVFVGDWVASNW
RRAYSVVMGWLDEILKNPAKASNDECFMTTAKVIHVVFDSLVDVIEDVKKTEYTIIQAKV
DAVMNALQNCQVVNAIQALVSILSSLFPILDVSDPRIPGILCKLISSLTLGIDDPEMAEV
RHHFTYLFIKMATVHQAHLIAHIELIWKEISAVAGQLSDHQKCTVVEGLFALCKLFKNFE
QYAQLMSVTLQQTVEFWASAEIMAAVSKPENFLIYIGLGDPLTNDDSLNLVYHTRRKQFS
FHVKILHSVISRLEVPTEIEVRMSVKFVCLDAKTGGFCITDVQGNLRICHPAAELFQMIF
PTLFTFLRCLKGIYSVSSLKVVHATYDKAKLFDLTDAEKSAVMGKPHETKKFEDMQRQEV
FYEKMKLFLAELSDHLQHLLIRCVFAFDWQFFALPNAASYVEHGIFGDLENLMDYRLRLF
LRRVITPLSNSTTEVQSYFVNGLAKLVEHLNDRLIARWHLIMKKENAYEFDDEQTKQQIF
TENVVSLLTKELALFLRSLLLQQDPEKPRATPKAVELPEFNSSAMDTDANDEQTSSSNAL
SFLGKSLLQRELQSNGILDEESFKHAYAFILGAMPQQCLNPEFVGRLYDLAVQLYEHFRN
IYPNAAQTVLLQTTECSLGDLQKPLKTHQVRQIFGELPPLQRPSPQPPSNDPAFPFDHFA
KFTQAL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgatattgatgtttcaagtgcaaataatttctaaattacttcaaattttaatc
tttttgttacgtatttctgttttgcaacagggcatctgttatgaacaattttttggagaa
cgtactgaaacgcttgatttgtggctaacagctgaaattgtttgcttggtcagaatgaac
gaaaatttgccagtcactggagacattcttccagatttgatttcagcgatagaatgtaac
ttccaaccaggaactgattacaatatgcgctcagcgtcgtatatgttaatcgaatcggtg
aaagaaagcaaccagtgtcttgagattggcttccgaatgcttgacatttgcttctcaatt
tatgtgcagcaatgtggcttgcaatttattttacatgctatcagaaccaaatggcccagt
ttgcctccagttgttcaacaattgtcgaaagatcgtcttattaattgcttgctttcatct
cctgctaataatgacattcgatctacacctgcaattatggaaggttttgctcagtgtatc
gttgcaatagtggaatgtgactggccgcagaaatggaaatcatttattgaagattgccgc
agcatatccaagattggtccgagtcaggcgatagtcgttttatctgttattgggcgcttg
atcgaagatgtaatggaatttgaattaatagaagatccatctcgtaacaaagagttgcgt
actgttgttttggattctgcgagtgaattttttgatttgacattagaaatgattaagcag
agcaaagcaggtgaaatcccaccctcatgtgctgagagttcagtgaggcaacgtatgctt
gaaaaaagttaccatcttctgaacagcctcattgcgtcgttgaatcctcgtccacacctt
tttaccaagtttgttgacaaaattttagaaccagctcgagatgcattcaagtcaggaaac
atacccgttgcagaaattgcaattagttgcttagaaagtgtttttccgagaaaagcaagc
gccaagaattacaagcctgttgttatattttttaaatctggaagactcaactttgcttat
gactttataatgatgacatcgttgttaccgtttgatcagcaaaattatgcattgctgaaa
gctgctacacatttgtttttcgacatagcaacttgcttttgttcattttgggttggctgt
tttgaacttttcgaaattgaagattgtattgataattgggattcaatttttcgcttgatg
ctttctcttttgaaacatccatcaacgtattgtcgaatgtggtgttcgctgattttcaat
tcaatgaaaaattgcaaaaaggtgtacaagatcgaacgctttgctccgatattgacagaa
ttatttgaatatatacccaaagcaacgctcaaaaacggtgaaccgtccaaagctgtcgag
ccgtttagtgcatatgcgaaatttgattatgaaacgaatactgctttttcgattgattat
catcgtaagttttgccttttgtttccttgtgcttttgcaagaagtgaaactttggtcgtt
gattcaggattgcgtgaggcttgcgaagtatttgttggagactgggttgctagcaactgg
cgcagagcatactctgttgtaatgggttggcttgatgaaattttaaaaaatccagctaaa
gcatcaaatgatgaatgcttcatgaccaccgctaaagtaatccacgttgttttcgactct
ctcgttgatgttatcgaagatgtgaagaaaacggagtacacgattatacaggcaaaagtg
gacgcagtgatgaatgccctacaaaattgccaggttgtcaacgcaattcaagcgcttgta
tcgatattgtctagtctgtttccaattttggatgtttctgatcctcgcattccgggcatc
ttatgcaagctaatttcttcactcacattgggcatcgatgatccagaaatggcagaagtt
cgtcaccatttcacgtatttgttcatcaaaatggccactgttcatcaggctcatttaatt
gctcacatcgaattgatttggaaggaaatttcagcagttgcgggacaactttcagatcat
cagaaatgtactgtggttgaaggtttgtttgctttgtgcaaactcttcaaaaattttgaa
cagtatgcgcagctgatgtcagtcacgttgcaacagactgtagagttttgggcatcagct
gaaattatggcagccgtaagcaagccagaaaattttctcatttatattggtttgggggat
cctttgacaaatgacgattcactgaatcttgtctatcacactcgccggaagcagttttca
tttcacgttaaaatattgcattcggttataagtcgactggaagttccgacagaaattgag
gtgcggatgagtgtgaagtttgtttgcttggatgcgaaaacaggcggtttctgcataact
gatgttcagggtaatttgcgaatttgtcatccagctgctgaactatttcaaatgatcttt
cctacgctttttacttttcttcgatgcttgaagggaatttacagtgttagcagtttgaaa
gtagttcatgcaacgtacgacaaggcgaaattgttcgatttaacggatgctgaaaagagt
gcagttatgggcaaacctcatgaaacaaagaaattcgaagatatgcaacgtcaagaagtg
ttttatgaaaaaatgaaattatttttggcagaactttctgatcacttgcaacatttactg
attcgatgcgtatttgcttttgactggcaattttttgcgttgccaaatgcagcgtcctat
gtagagcatggtattttcggggatttggaaaatttaatggattatcgattgcggttattt
ctgagacgagtgatcactccattgagcaactccaccactgaggtgcaaagttatttcgtc
aacggtttggcaaagttggtcgaacatctaaatgaccgtctcatagctcgttggcatcta
attatgaaaaaagagaatgcctacgaatttgacgacgagcaaactaaacagcaaatattc
actgagaacgttgtttcattgctaactaaagagttagcattatttttacgatctttgctt
ctgcagcaggatccagaaaaacccagagctacaccaaaagccgttgaattgcctgaattc
aactcatcggccatggatacggatgctaatgatgagcagacatcaagcagcaatgctctc
agttttcttggcaaatctttacttcaaagagagctacagtcaaatggtattcttgacgaa
gagtcgttcaagcatgcctacgctttcatattgggagctatgccgcagcagtgtttgaat
cctgaatttgtgggaagattgtacgacttggctgttcaactatatgaacattttcgtaat
atttatccgaatgcagctcaaacggtgttgttgcagacgacggagtgttctttaggagat
ttgcaaaaaccattgaaaacccatcaagttcgacagattttcggtgagttaccaccattg
caacgaccttctccgcaaccgccgtctaacgatcctgcattcccctttgaccattttgca
aaatttactcaggctctataa
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integrated database retrieval system
