Trichinella spiralis: Tsp_03803
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Entry
Tsp_03803 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tsp
Trichinella spiralis
Pathway
tsp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
Tsp_03803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_03803
Membrane trafficking [BR:
tsp04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
Tsp_03803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
10910773
NCBI-ProteinID:
XP_003374607
UniProt:
E5SH77
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MEKEKDLSFKNWIVIMKDDDRQDNAKIGKIFKLCYHKRDPKLPDMEFWYSNKDFPELKDG
DVVEIYHNDAPSNRLLVLARGGCMEFLCKTGNTVSVDENLASIFHLRNYGDVVVRKVNIN
SVVLDVLELSVKEQYISNSDYYRLRQVIVNTCVYMNKKIEHWGMRVYVQEMFRFGERVNA
GYVSENTKIVLRSSSAVVYIMIQMSREMWEFDNEGDLHAEKCLEGFLPDLFRKWDERNCT
HFVSIVLFSRCFYNTEQLKNLPSEVYEEMMQNINGEYYRDFYHLIIQNEQFDDWRWVLEK
VRIGFAQFTSKINQSNELKLKLQGSNTTSSTGNILESLNIPLNYFTKFYKNRSFERTGQL
IMVITPGSGVFQVDNDLVQLTRQRCLDYGTAVDLVCLGEQPYHVVPLFALNADKNYEMNL
VLNSKTPKELYIAPFWMNVSYYKPAKHALSVCAYKSRLQLRDVPATSNIRLQPPSFVIHA
SRRRQRGPFDLYDADRLLHKPLDDEKEDEELDHEYSQILIVVDPVSGLRTRTHVPRSHVP
MSGRLRWDSNVALSRRIHASRAENEVEVKDDAIGLNPFLPSRFSIPISADRRRWIHVFPV
DSFGCYKQPHHFIRGKSVIYYGRHLEFTPEEVVDHHAEIVISNGLNKDADSHIGPGLGKK
YVWAWGATGEQRWIPELEIGVDWKSLTVPACLPITTDFFPDAEMLNANYVTNESTIQIHI
GIERRWESAMYSDGRLALFDEFVAQRLLLGFQMVKIDKPTFRRSLASILPSLFKDPPEKQ
CLLGLGVLYHLIVLRESQLSSITLKPKFYPPLYGKVEYTYELLTPDVEGYKTNGTVFSCS
RIATINWPGRDHVATLCGCGDEYELLNTVECLEGRFMVVPFDQPVIETIMNSNSPPYDLF
KWSERRSVEWNMAMCSLFVRFLEMINRLRRPGNSIHEEVKLAKRIEANQFEQIAKVASAQ
ISIESSQSPLPVRTVVSATLVHWMMRNVKNVTSLSDAVDLCRLLVGRKLLLGIRGKCRTQ
FYYGFYLYYFDDSNTKWHANAVDPRWLIETRFSYSAVKFLDHEADEVNDSQLNNFCLDVD
PNHRSSRPEWCDMLVSPVFCPQKAFEIHMRWLTATGNIVGDLVHTLWRRSFPLGLNMVPV
PIEPFLLGESQGADPFRNPIFVPFDKELIEPLNERLYRKVASQILGRFGFLPFHCYSGQL
NRCSAKQFVHCTGGMLAMVSVTKPTERGLTWTWNAMVGRRYINHPITGDASFQDKLLHDL
RRLCLAENGDSRLKSIINLCENQQPT
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaaaaagatttgagcttcaaaaattggattgtgattatgaaagatgatgat
cgacaggataatgcgaaaattggtaaaatattcaaattgtgttatcataaaagagatcca
aaacttccggacatggagttttggtatagcaataaagattttccagaattgaaggatggt
gatgtggttgaaatttaccacaatgatgcaccatcgaatcggcttttggttctagctcgg
ggtggttgtatggaatttctttgcaaaactggaaatacagtaagcgtggacgaaaatttg
gccagcatatttcatctgagaaattatggcgacgttgttgttcggaaggtgaacatcaat
tcggttgttttggatgtgttggaattgtctgtcaaagagcagtacataagcaattcagat
tattatcgtctgcgccaagtgatagtcaacacgtgcgtctatatgaacaagaaaatcgaa
cactggggtatgcgagtttatgtgcaagagatgttccgtttcggcgaacgagtcaacgcc
gggtatgtcagcgaaaatacaaaaatcgtattacgttccagcagtgctgttgtatacata
atgatccaaatgagccgagagatgtgggaatttgacaatgaaggcgatttgcacgcggaa
aaatgtttggaaggctttttgcccgatttgtttcgaaaatgggatgagcgaaattgtacc
cattttgttagcattgtattattttcgcgttgtttttacaatactgaacaactgaagaat
ttgccttccgaggtttatgaagagatgatgcaaaatattaatggtgaatattatcgagat
ttttatcatttgatcatacaaaatgagcagtttgacgactggcgatgggttttggaaaag
gttagaatcggctttgctcagtttacttcgaaaattaaccaatcaaatgagttgaaactg
aaactgcaaggtagcaatacaacttcgtccacgggtaacattctcgaatcgttgaacatc
cctctgaattattttacaaagttttacaaaaatcgcagtttcgaacgaaccggccaattg
attatggtaattactcctggttctggagtttttcaagtcgacaatgatctagtgcagctc
accaggcagcgttgccttgattacggtacggctgttgatttggtttgccttggcgagcag
ccttatcacgttgtgcctttgtttgcgctcaacgctgacaagaattatgaaatgaacctg
gtattgaatagcaaaacgcccaaagaattgtacatcgctccattttggatgaacgtcagt
tattataagccggccaaacatgctctgtcggtttgcgcttataaatcacgattgcaactg
cgcgatgttcctgcgacgtcgaatatacgacttcagccgccttcgtttgtcatccacgct
tccagacgtcgacaaagaggtccgtttgatttgtacgacgcagacaggttgctgcataaa
cctctcgatgatgagaaggaagacgaagagttggaccacgaatattctcaaatactgatt
gttgtggatcctgtcagcggattgaggaccagaactcacgtacctcgaagtcacgtgccg
atgagcggccggctcagatgggactccaatgtagctctgagtcgaagaatccatgcttcc
agagctgagaatgaagttgaggtgaaagacgatgcgattgggctgaatccttttctgccg
tctagattttcaattcctatttcggccgatcgaagacgttggatacacgtgtttccagtc
gattcatttggatgctataaacagccgcatcattttatacgtggaaaatcggtcatctat
tatggtcgtcatttggagttcactccagaagaagttgtcgaccatcatgccgaaatagtt
atttccaatggactgaacaaggacgccgattcccacatcggtcctggacttggtaaaaag
tacgtatgggcttggggtgcaaccggcgaacaaagatggataccagaattggaaattgga
gtcgattggaaatcgctcactgttccagcatgtttgccaataacgactgatttttttcca
gatgctgaaatgttaaatgccaattacgtcaccaatgaaagtacaattcaaattcacatt
ggcatagagagacgttgggaaagtgccatgtacagtgatggacgtttggctttgttcgat
gaattcgttgctcagcgattattgcttggctttcaaatggtcaaaattgacaaacctact
ttcagaagaagtctggcatcgattttgcccagtcttttcaaagatccaccagagaaacag
tgcttactgggactgggtgttctgtaccaccttatcgttttgcgagaaagtcagctcagt
tctatcacgttgaagccgaaattttatcctcctctctatgggaaggtcgaatacacttac
gagcttttgactccggatgtggaagggtataaaacaaatgggacagtattttcttgcagt
cgcattgcaaccatcaactggccgggcagggatcacgtggcaacgttgtgcggttgcgga
gacgaatatgaactgctcaacactgtggaatgcttggaaggtcgattcatggttgtacct
ttcgaccaaccggtcatcgaaacaataatgaacagcaattcaccgccgtatgatttgttc
aaatggtcggaacgtcgtagcgtggaatggaatatggcgatgtgctcgttgttcgtacgg
tttttggaaatgatcaaccgtttgcgaagacctggcaacagtattcacgaggaagtgaaa
ttggccaagcgaattgaagcgaaccaattcgaacagatagctaaagtggcgtcggctcag
atttcgatcgaatccagccaatcaccgttgcctgtgaggacagtggtcagtgcgacgttg
gttcattggatgatgcgcaacgtgaagaacgtgaccagtctgtccgacgcggtcgatctg
tgccggctgctggtcggccggaaattgttgctcggaatacgcggcaagtgcaggacccag
ttctattatggcttctatttgtactatttcgacgatagcaataccaagtggcacgccaat
gcggtcgatcctcgttggctgatcgagacgagattttcatattcggcagtgaaatttttg
gaccacgaggcggacgaagtgaacgattcgcagttgaacaatttctgtttggatgtggac
ccgaatcaccgtagcagtcgcccagaatggtgcgacatgctggtcagtcctgtgttttgt
ccacagaaagcgttcgaaattcacatgcgttggctaacggccactggaaatattgtcggc
gatttggtgcacacgttgtggcgtcgcagttttccgcttgggttgaatatggttccagta
cccattgaaccgtttctgttgggcgaaagccagggcgcggatccatttcgaaatccaata
tttgtcccgttcgacaaagagctaattgaaccgttgaacgaacgcctctaccgcaaagtg
gccagtcaaattttgggtcgtttcggctttttgccgttccactgctactcggggcagttg
aatcgatgttcggcgaaacaatttgtccactgcaccggcggtatgttggcaatggtcagc
gtaaccaagcccacagagcgtggtctcacttggacatggaacgcgatggtcggtcgacgt
tatatcaatcatccgatcaccggcgacgcttctttccaagataaacttttgcacgacttg
cgtcgactctgtttggctgaaaatggcgactctcgactgaaaagtatcattaatctttgt
gaaaatcagcagcctacttga
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integrated database retrieval system
