Trichinella spiralis: Tsp_03951
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Entry
Tsp_03951 CDS
T01609
Name
(RefSeq) putative leucine Rich repeat-containing domain protein
KO
K02603
origin recognition complex subunit 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_03951
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03951
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
Tsp_03951
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
Tsp_03951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
AAA
WHD_Cdc6
AAA_lid_10
PX
LRR_8
AAA_22
NPHP3_N
LRR_9
AAA_16
Cdc6-ORC-like_ATPase_lid
Cdc6_lid
SLFN-g3_helicase
ATPase_2
AAA_2
nSTAND3
NB-ARC
LRR_NXF1-5
AAA_19
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
10904043
NCBI-ProteinID:
XP_003374762
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MALFSCMNVEPLHKYCQITKFANKEDYIVYTVRVNVEDVSWTLDRRYSEFDAFDRAHVKF
PGFPSLPPKKVIGNQDVNFLNQRKVQLEKYINSVFIFDCMEQKAKGLASLPRLIASFLHF
NRYEIHSIIDEIAIVHVGSDKSSDSFFEFSTLELHAVTERFKMAGSSFGCSPDFRFDFGQ
VAEFIANVKKLKISGNKCTGTSDIRLDSLRFDLMHFKSLEHLWICYCDASNISGMEYIAA
NLSSLTVHNTLDRISTALRYVHFLDLACNCLTDICNLQHLPYLRELNLSNNRIEKIDDWH
LKLGNVKKIWLVNNRIKQLKGLAKLYSLEFLDLRDNQLSQIGHIWPLGQLPCLHELLVSG
NTAENMVDYRTRILEAFGSRANELRLDNEYPTQRELDTVAVRLAIREAKEDRRRQLLKVT
EQISRELNLAEAEVLNISKQAGSSAYSEPKRTLKEMRRKEAEERLKMEKIKKAAGDKSPK
SKASSKNTSEKSGSDNSICFVFIVSYSFFIHSFKEKNTKRKSKSRSRSRSRSRSRDRSQN
SSKKMDKSDTKYNSGAVYGRKPDLDEADYPFGRIEHTPSSAVSSDLFPTNEKKKCPRNYC
MYALFFIICCIVATSCSYAEEKNSDLCSVASDDSLPALSRKNPERKCTVESSSDEEIGNN
ACELSSLNVKMRSASFSKRNLTIGKDISFSARCYEFKSESSWSDFESDSDFVKKTTLKKE
VDDKFPSCRRSTRIRAGHSGLEKCPTSHHANSSQLRRKNGRKNAPRASLNRRSTAQYCSI
SDSDLESLESESDFACKTKRVRKLNEKDNKYNKKSQTEEDYTPSNSRLKKGFQGCFHSAF
DELKARLHTSAVPANLPCREKQCLEIENFVKCCLKSGNNGCLYISGVPGTGKTVAVRQAI
RALQNDNKLPAFVYCEINGMQLADPKNIYFKMAGSVFGSSWKSKSADKTQKMLNNFFNDS
NPDKPHLIALLDEVDYMIAGKQRTLYQVFDWSTLENSKLVLLTVANTLDFPERILCKRIT
SRLGLTRLCFPSYSHAEIQKIIEVRLSGCSAVSADAVQLVSRKVASVSGDIRRALEICRL
AADIASSECENEKAEVKRNVSGQKRKQQQEQKQQLTLEHIGLALKEMASNLKFAFIKNTS
LHQQLVLRALVCLYNQTACDEVSFRMINIQYKKICHDEDKEPLGVRELDRILHIFVSVGI
LVLGKQQLGYLDSYFRFAMNAEDISASLQ
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggcattgttctcttgtatgaatgttgaacctttgcacaaatattgccaaatcaccaaa
tttgccaacaaagaagattacatcgtgtacacagttcgtgttaatgttgaagatgtgtct
tggactttggaccgtcgctacagtgaattcgatgctttcgatcgtgcacatgtgaaattt
ccaggatttccgagtcttccaccgaaaaaagtgatcggcaatcaagatgtcaattttctc
aatcaacggaaagtgcaacttgaaaagtacatcaattcagtgttcattttcgactgcatg
gaacaaaaagccaaaggactggcatccctgcctcgtctgattgcatcctttttgcacttc
aatcgatacgaaatacattcaattattgatgaaattgccatcgttcacgttgggtccgat
aaaagtagtgattctttttttgaattttctacactcgaattgcatgccgtgaccgagcgt
ttcaaaatggccggctcatcttttggctgttctcctgattttcgtttcgactttggtcaa
gtagcggaatttattgctaatgttaaaaaattgaaaatttctggaaacaaatgcaccgga
accagtgatattcgactagactcgcttaggttcgatttgatgcacttcaaatcgttggaa
catttatggatttgttattgtgacgcgtccaatatttcgggtatggaatatattgcggca
aatctttcttcattgactgttcacaatacgttggatagaatttcgacggcgctgcgttat
gtccactttttggatttggcctgcaattgccttacggatatatgcaatttgcagcatttg
ccttatcttcgagaattgaatctttccaacaatagaattgaaaagatcgacgattggcac
ttgaaactgggaaatgtgaaaaaaatatggctagtaaataatagaatcaaacaactgaaa
ggactcgcaaaattgtattctttggaatttttggatctcagggacaatcaactgtcccag
attggtcacatttggccactcggtcagttgccgtgtcttcacgaattgttggtcagcggt
aatacagccgaaaatatggtcgactacaggactcgaattttggaagcattcggcagtcga
gccaacgaactgcgtttggataacgaatatcccacccaacgtgaactggacactgtggcc
gttcgactggccattcgtgaagcgaaagaggaccgtcgacgccagctgctcaaagttacc
gagcagatcagtcgtgagctgaatttagccgaagccgaagtgttgaacatcagcaaacaa
gccggttcatctgcttactcggaaccgaaacgaacattgaaggaaatgagaagaaaagaa
gctgaagagcggcttaaaatggaaaagattaagaaagctgcaggggacaagagtcccaaa
agcaaagcatcctcaaaaaacacctcggaaaagtcgggtagcgataattcaatttgtttt
gtattcattgtttcatattcattttttattcattcatttaaagaaaagaacactaaaaga
aagagcaaaagtagaagcaggtcgagatctcgttccagatccagagataggtctcagaat
tcaagtaaaaaaatggataaaagcgacaccaagtacaacagtggtgctgtatatggaaga
aagcctgatcttgatgaagcagattatccgtttggaaggatagaacatacaccatccagt
gctgtttcgtccgatctttttccaactaatgaaaagaaaaaatgtcccagaaattattgc
atgtatgcattattctttatcatatgttgtattgtagctacttcatgttcttatgccgaa
gaaaagaacagtgatttgtgttctgttgcttctgatgattcacttccagcgttgagtcga
aaaaatcctgaacggaagtgcactgttgaaagtagtagtgatgaagaaattggaaacaat
gcatgtgaactatcgtctttgaatgttaaaatgcgatctgcttcgtttagcaaaagaaac
ttgacaatcggaaaggacattagtttttcagcccgttgctacgagttcaaaagtgaatca
tcgtggagtgattttgaaagtgactcagattttgtaaagaagacaactttgaagaaggaa
gttgatgataaatttccctcgtgtagacgcagcacacgaattcgagctggtcattcgggt
ttggaaaagtgcccaacctcacatcatgcaaacagttctcagttgagaagaaaaaatggt
agaaaaaatgcacctagagcttcactgaacagacgttcaactgcacagtattgctctatt
agtgatagtgatttggaaagtttggaaagcgaatctgattttgcgtgtaaaacgaagcga
gtgcgaaagcttaatgaaaaagataacaagtataataaaaaatcccaaacggaagaagat
tacacgccttccaattctcgtttgaaaaaaggttttcaaggttgttttcatagcgcgttt
gacgagctcaaagctcgccttcatacatctgctgtgcctgctaaccttccttgccgggaa
aagcagtgcttggagattgaaaattttgtcaaatgttgtttgaagagtggcaataatggt
tgtttgtacattagcggagtgccgggaactggaaagacggtcgcggttcgtcaagcgata
cgcgctttgcaaaacgacaacaaactgccggcatttgtttattgtgaaatcaacggtatg
cagctagcggatccaaaaaatatttatttcaagatggctggttcggtgttcggttcgtct
tggaaatcgaaatccgctgataaaacgcagaaaatgttgaataattttttcaacgattcc
aaccctgacaagccgcatcttattgctctactcgacgaggtggactatatgattgctgga
aagcagcgcacgttgtaccaagtgttcgactggagcacgttggaaaattccaagttggtc
ttgttgactgtagctaatacgcttgattttcccgaacgaattttgtgcaaaagaatcaca
agtcgtttgggtttgacgagactttgctttccatcgtacagtcatgcagaaattcaaaaa
attatcgaagttcgtctgtccggctgcagtgcagtcagtgcggatgcagttcagctggtg
tctcgtaaagtagcttcggtatctggcgacattcgaagagctttggaaatttgtcgctta
gctgctgatatcgcctcttcagaatgtgaaaatgaaaaagctgaagtgaagcgtaacgtc
agcggtcagaaacgcaaacaacaacaagaacaaaaacagcagctcacgttggaacacatc
ggtctggcgttgaaggagatggccagcaatttgaaattcgccttcatcaaaaatacatct
ctgcatcaacagttggtgcttcgggctttggtttgcctgtacaatcaaactgcttgcgat
gaggtgtctttcagaatgatcaacatacagtataagaaaatatgccacgacgaggacaaa
gaaccgctcggtgtcagagagcttgatcgaattctgcacattttcgtctcagttggcatt
ctggttctcggtaagcaacagttgggttatttggattcttatttccgttttgcaatgaac
gctgaggacatcagcgcatctttacaataa
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