Trichinella spiralis: Tsp_03954
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Entry
Tsp_03954 CDS
T01609
Name
(RefSeq) protein Red
KO
K13109
IK cytokine
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_03954
Spliceosome [BR:
tsp03041
]
Complex B
Other components
Complex B specific factors
Tsp_03954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RED_N
RED_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
10904046
NCBI-ProteinID:
XP_003374765
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MPSYIELELVAIVGEQLTIAIIKLKVCANNEEFICLALKFGKHFQRQQQAGQPLTNDDFR
KLLMTPRPVSQSSLRQTQLMGRAKVASRSQKDEKKKKLINIIKTQDGPIRGNSHEKNELN
EILKHYRDRAKERRECELKEYQQEIDMLATSGYRAVAPTLKAAVDMTARRKQIIEESKYL
GGDMEHTHLVKGLDYALLQKVRSEISTREKLTPSVEKTTTAYTVEDSLTPEVESSIKSST
VKNIYQLLFKKEAKKVNEMFIPYRMAYIVELDEENAESDIPTTLIRSKHECASQEVVSAA
SIDDMIIQKLGKVLSYLRADNRKKKKEKGKGKEDESVANQDLKKLHFIVFNVVIYFDFAL
EKTFFDCSIVISSIYEDIGEYVPALSRQPKVKSEAEEQGKKLHGDYDRNSKLEHEGSRLK
VIHKEENNDSTKLWHVSNDEQFHKHSSGRYFSDVSDAKDQEVKAMSRKSDRRKGTAQTTA
TNFVEPKSVKPDALKLDTGSSVDSYAECYPSSMAFYDAAGDSDDEADYSKMDLGNKKGLV
RRWDFDTEQEYEEYMSRREALPRQVVQRMNIRFRETKRNALTSSSYGVKMNDGRRTRKLP
GTRSEKDDKAKINRQWQQITQILSKRKEFSEYCSYFAALLRNALFVAHVTICELLVAVIA
CKVQLYNKIVEM
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttatatagaattggaacttgttgcaatagttggcgagcagttgacaatagca
ataataaaactaaaagtttgcgctaacaatgaagaatttatctgtctggcattaaaattt
ggaaaacattttcaaagacaacagcaagctggacaaccacttactaatgatgactttcga
aaactacttatgacacctcgaccagtgagtcagtcatcacttcgtcaaacacagcttatg
ggacgtgccaaagttgcttctcgatcccaaaaagatgaaaagaagaaaaaactgataaac
atcataaaaactcaggatggtccaataagagggaattcacatgagaagaatgagttgaat
gaaattttgaaacactatcgagacagagcgaaggaaaggagagaatgcgaacttaaggaa
tatcaacaagaaattgatatgctagccaccagtggatacagagcggttgctcctactctc
aaagcagctgtggatatgacggctagacggaagcagattatcgaagaatcaaaatatctt
gggggcgacatggaacacactcatttggttaaaggtcttgattatgctttattgcaaaaa
gttcgaagtgagataagcactcgagaaaaacttactccttctgtcgaaaagacaaccact
gcatatacagtagaagacagtttgacaccagaagttgaatcatccataaaatcttcgaca
gttaaaaatatttaccagttgttatttaaaaaagaagcaaagaaagtgaacgaaatgttt
attccatacagaatggcttatattgtggagttggacgaggaaaacgctgaatctgacatt
ccaactacattgattcgctcgaaacatgaatgtgcttctcaagaagtagtttcagcagcc
agcattgatgatatgattatacaaaaattgggcaaagttctgtcttatttgcgtgcagac
aataggaaaaagaaaaaagaaaaaggaaaaggcaaagaggatgaatcggttgcgaatcaa
gatttgaagaagttgcattttattgtttttaatgttgtaatatatttcgacttcgcgtta
gaaaaaacgttcttcgattgtagcattgtcatttctagcatttatgaagatatcggcgaa
tatgtaccagcactgtctaggcaaccaaaggtgaaatccgaagcagaggaacaagggaaa
aagctgcatggagattatgatcgaaattcaaaattggaacacgaaggaagccgactaaaa
gtgatacataaggaagaaaataacgactcaacaaagttgtggcatgtgtccaatgatgag
cagtttcacaagcattcttctggtcgctatttctcagatgtttcagatgcaaaggatcag
gaggtgaaagcaatgagcagaaaatctgacagacggaagggaaccgctcagacaacagca
acaaattttgttgaaccgaaatccgtcaagccggatgcacttaaacttgatactggttca
tcagttgacagttatgcagaatgttatccaagcagtatggcgttttatgatgcagctggc
gattctgatgacgaagcagattattcaaaaatggatttgggcaataaaaagggtcttgtc
agacgttgggattttgacactgaacaagagtatgaagaatacatgagcagaagagaagca
ttgcctaggcaagttgtccaaagaatgaatatccgttttcgagaaacaaaacgcaatgct
ctaacatcttcttcttacggcgtgaaaatgaacgatggacgtcggacaagaaagcttccc
ggtacgaggagtgaaaaagatgacaaagcgaaaataaaccgtcaatggcagcaaattacc
cagatactttccaagagaaaagaattttcagagtattgcagctactttgcagctttgttg
agaaatgcactttttgtagctcatgttacaatctgcgaattgcttgttgctgtaatagct
tgtaaagtgcaattgtacaataaaattgttgaaatgtaa
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