Trichinella spiralis: Tsp_04005
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Entry
Tsp_04005 CDS
T01609
Name
(RefSeq) zinc finger protein
KO
K10500
zinc finger and BTB domain-containing protein 17
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_04005
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_04005
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
Tsp_04005
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
Tsp_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-Di19
zf-met
zf_UBZ
zf-C2H2_6
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
10904260
NCBI-ProteinID:
XP_003374817
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MEVVSEAEETHVLDVDPAQLVQLLASSEDGTAQFIDEQGNTITLTAEQLVEAGITLETLE
GADVPMYDENSQYLDQSSQQYYVMEGTDQEPPQLEPEAPSKPPELVPADPDAENFASKPP
VLSASVTPTSAGQGPAGFDADLLKYPDHARAMFLQFQRSAQENELQRARLSRHVTLLVNA
LIKSFPDTDFHEIVVRSSQDSESRPQSVILRKTAPDQIAPNQTYQMQLETGESRFVIVQD
EESEDMPVLDSSMTPSKAVDEDGQYQCEHCSKRFNKESQLKRHKDFAHAKSRTFFCRFCN
CDLILPSEEIFQAHIRLQHTVKEEEPESVMGSGGNDEDEDIEEEPDYELLDLEKANEESD
QRLGEHKCNMCSMNYISALLLKRHMKEEHEHKILHTDEIPYMCGFCPKRFKWKSNFLKHK
EVHNAHFKFTCNQCNTNFPSQAAVDVHFKSKHMERIREHVCPLCQKSFYEKESLTKHMRE
HNGPFYTCGQCGRQFVEEALLKKHITIHTETRHYVCNVCEKMFSRASSLSAHLRIHSGER
AYKCKRYTRLCTRDPNCISAVLVGKHFQNWKTCKCMSMVTAAFVPIRVWNVTGHTAVLDT
LKNTCRCTLRNNLTAQQYYVECPIGFCFRYIILWEQNNMLKEAAVVADGATQEMNDIETM
QIDLTQFGKSTTTTGNGNGASAPFTLQVNPTESDIAAQALNPNQPGLLTDAPSDSSFDSE
TLKQSASSLQLVDENVHLVHTVPGSSMVVLQDGVLQNTNGGESALDLAAISSTTTEDGTI
YISADNLHVLTDPGMMMATFPPDMN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtcagtgaagctgaagaaactcatgtactggatgtggatccagcgcagctg
gtacagctactggctagttccgaggatgggacagcccaattcattgacgaacagggaaac
actattaccctaacagcagagcagctagttgaagctggtattactttggaaacgttagaa
ggagccgacgtccctatgtatgatgaaaattcacagtatcttgatcaaagcagtcagcag
tattacgttatggaaggcaccgatcaagaacctccacagttagaaccagaagcaccttca
aaaccacctgaacttgtgcctgcagatccggatgcggaaaattttgcttctaagccccca
gttttatctgcatcagtgactccaacttcagcaggccaagggcctgcaggcttcgatgca
gatttgttgaaatatccagatcacgcccgtgcgatgtttctacagtttcagcgttctgca
caagaaaacgaattgcaacgtgcacgcctgagtcgacatgtcacgttgctggtcaatgcg
ttgatcaaaagtttcccagacacagattttcatgaaatagttgtgcgatcatcacaggat
tcagaaagtcgtcctcagtcagtaattttacgtaaaacagctccggatcagatagctccg
aatcagacctatcaaatgcagttggaaacaggagaatcgcgttttgtcatcgtacaagat
gaagaatccgaagatatgcccgtattggattcatctatgacaccttcaaaagctgttgac
gaggatggtcagtatcagtgcgaacattgctcgaaaagatttaataaagaatcgcagctg
aagcgtcacaaggactttgcacatgcaaaaagtcgaacattcttttgccgtttttgtaac
tgtgatttaatattaccatcagaagagattttccaagcgcatattcgtttacaacacaca
gttaaagaagaagaacctgaatctgttatgggttctggtggaaatgatgaagatgaagat
attgaagaagagcctgattatgagttgctagatttggaaaaggcaaatgaagagtctgat
cagcgtttgggtgagcacaaatgcaacatgtgcagtatgaactatatatcagcactgttg
ctcaagagacacatgaaagaagaacatgagcacaaaattttgcacactgatgaaataccg
tatatgtgtggtttctgtccgaaaagattcaagtggaaatccaactttttaaagcataaa
gaagtgcacaatgctcattttaaattcacctgcaatcagtgtaacacgaattttcctagt
caagcagctgtagacgttcattttaagtcgaaacatatggaacgtataagagagcatgtc
tgtccgctttgtcagaaaagtttctatgagaaagagtcactgaccaaacatatgcgtgaa
cacaacggaccgttttatacatgtggccagtgcgggcgacaatttgtcgaagaagcactg
ctgaaaaagcacattaccatccatactgaaactcgtcactatgtttgtaatgtttgtgag
aaaatgttctctcgagcaagcagtttaagcgcgcatttgcgtatccacagcggagaaaga
gcttacaagtgcaaacgatacacaagactttgcacaagagatccaaattgtatcagtgca
gttcttgttggaaagcattttcaaaattggaagacttgcaaatgcatgtcgatggtcacc
gcggcattcgtccctatccgtgtttggaatgtgaccgggcatacagcagtcttggacacc
ttgaaaaacacatgcaggtgcacgctacggaacaaccttacagctcagcagtactatgtg
gagtgtccaattggattttgctttagatatataattttgtgggaacaaaataacatgctg
aaagaagcggcggttgttgcggacggtgcaacgcaagagatgaacgatatagaaacgatg
cagattgatttgacacagttcggaaaatcaacaactacaactggcaatggtaatggagca
tcagcgccattcactttgcaagttaacccaaccgagagtgatatagctgcccaggcgttg
aatcctaaccaaccaggcctattgacagatgcaccttctgattcaagcttcgacagtgaa
actttgaagcaatcagcatcctctttacagctggtggatgaaaacgtgcatctggtgcat
actgttcctggtagcagcatggtagttctacaagacggtgttttacaaaatacaaacgga
ggcgaaagtgcgctagatttggccgcgatctcctccacaactaccgaagacggaaccatt
tacatatcggcagataatttgcacgttctaactgatccaggtatgatgatggctacgttt
ccaccggacatgaactaa
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