Trichinella spiralis: Tsp_04046
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Entry
Tsp_04046 CDS
T01609
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
tsp
Trichinella spiralis
Pathway
tsp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
Tsp_04046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsp03051
]
Tsp_04046
Proteasome [BR:
tsp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
Tsp_04046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN2_N
Mesd
RPN2_C
PC_rep
HEAT_2
Cnd1
HEAT_EZ
zf-C2H2
zf-C2H2_4
zf-C2H2_9
zf-C2H2_6
zf-met
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
10904465
NCBI-ProteinID:
XP_003374860
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MKDVVFEDVFPSEEELSSPAKSICPVCQTSFKNWQSLNAHRLRNHAASKSGGDSSYHRYF
CPREKCKYSKIAKKVWFKSMKLLKQHFQKVHMAKLLVCSVCKDRRFSLLRDLQFHEKVCL
KNLIENVSTMDMRMDNQSEKDKSIATSMAPTVYVLMPACKPAKVDAETQTDFTVDNKDIQ
CEVTEKYSWPSEGAGMSHSGQRNPFELDSLDFGCQAVACSHESHQDSLLMNNFCQTTSFV
ADASVDANLPLLNAEDHHQPPPDPLLTKWFFEDEAEEISGTLMLVFCLTNTTAVEVEEMP
ADHPQVYTMKPPVNKHPRDYTEADLQGLFDQWEANDDPLDPDEIEGWRKPPPLDLNLLKV
HTSEQASRIIKKDREMKLFVKFDPKMSRAEIDDLTNIWLMRFFNNHIVSKRRFSQEKEVE
FLFIEGSQAWDAYHFVMDQDEVYEVMLEGNKYKGKAQLRGFTSLLDEQSVALQVYALENL
DNLVPSFWHEIADCVSRIEELYEDENFPSRKLAALLASKVCVYYYLGIYKEALKYALYAE
ELFDVKIHSEYSETIVDKDCESEAITDPRLEAVINRMFDRCFAECEFKQIVGIALETRRI
DMLNKALIESEDTVELAAYCAKCAVQFVQNRTYRNEVFHHLVELCSSSPLLDYNTLCQES
VLAAYQIAFDLFDSASQQYLTGMLKCISPSEVEEKSDETNVENSDSKNKTKEEKEKSEEE
LKLEPLRRILSGELTIFTHMQFLIKNNRADLQILKNIKDTVRSSVCHTATVIANGIMYCG
TTCDDFLRNNVDWVSKANNWSKFSAVASLGVIHKGHETEATRLLESYLPKDVVSATSSGY
LEAGGFYALGLIHAGHGNETLFARLQRELNSTNNEVLRHGLCLGFGVAALGSLRADLCDD
LRTILFQDEAVAAEAAGIGIGLILAGSLDYEVFKEMYMCATDTQHEKIQRGICVGIACIA
FGRMEQANSWADELLKDQNPILRRAGVYTLAMAYCGSGNTNVVGRLLHLSVSDVNDDVRR
AAVSSIGFVMSRNPTACPQLVSLLMESYNPNLRYGAAIALGVSCIASGLREAIALLEPML
DDTVNYVRQGALIAMAMVLMQHNECTAPKVKDFREKLMKIIGDKHEDVISKFGAIIAQGL
LDAGGRNVTVNLIGRNENVSMITAIGLLVFLQSWYWFPLAHFISLALQPSCLIGLNSDLK
MPNMTFISNAKPSTYAYPPPIVEKQAKNPEKVVAAVLSYTHKSRRRDREKQAKQQEQEEK
MDVDEAAVNKNKDKDVPDAAATATQAAPAIPVESSTPAVENVPSVDNKLKVMTMPDDSNF
IPIKPITHGGIILMNEKSAEVAVDFVEVVKANVALGDEEAEPTAPSPFDYFIENESNGQN
QEQTQTDTTSAATQ
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgttgtttttgaagatgtatttccatctgaggaagaattaagtagtcctgct
aagagtatttgtccagtttgtcagacatcatttaaaaattggcaaagtttgaacgcacac
agattacgaaatcatgcggcttcgaaatctggcggtgatagcagttatcatcgttatttt
tgtcctcgtgaaaaatgcaaatattctaaaatagccaagaaagtttggttcaaatccatg
aagttactgaagcagcattttcagaaagttcatatggccaagttgttggtttgctctgtt
tgcaaagatcgtcggttcagtttgctgcgtgatttgcaatttcatgaaaaggtgtgcttg
aagaacttgattgaaaacgtttcaactatggatatgcgaatggataaccaatcagaaaaa
gataaatcgatcgcgaccagcatggcgccgacggtttatgtcttgatgccggcctgcaag
ccggctaaagtcgacgctgaaacacagaccgatttcacagtggacaacaaagatattcag
tgtgaagttacggaaaagtacagttggccgtctgaaggagctggcatgtcgcattctggg
cagcgtaatccatttgaattggactctttggatttcggttgtcaggcggtcgcttgttcg
cacgaaagccatcaagattcactgttgatgaataatttttgccagacaacttcgtttgtg
gccgatgcgtctgtggatgcaaatttgcctttgttgaatgctgaagatcaccaccagccg
ccgccggatccactgttgaccaaatggtttttcgaagatgaagcggaagaaattagtggc
acgcttatgctggtgttttgcttgactaacacgacagcggttgaagtcgaagaaatgccg
gctgatcatcctcaagtttacaccatgaaaccaccagtgaataagcatccacgcgactac
actgaggctgacttgcaaggattgtttgatcagtgggaggcgaacgacgatcctctggat
ccggatgaaattgaaggttggcgtaaaccacctccgctagatttgaacttgctcaaagtg
catacttcggaacaagcttcgcgtattatcaagaaagatcgtgaaatgaaactgtttgtc
aaatttgatcccaagatgtcacgcgccgaaattgacgacctcacaaatatatggttaatg
cgctttttcaacaatcacatcgtcagcaaaaggcggttttcacaagaaaaagaggtcgaa
tttctgttcatcgaaggatctcaagcttgggatgcgtatcattttgtcatggatcaagac
gaagtttacgaagtgatgctcgaaggcaataaatataaaggcaaagcacagttgcgagga
tttacatcattgttagatgaacagtcggtagcattgcaggtttatgcgttggaaaatctc
gacaatttggttccaagtttttggcatgaaattgccgattgtgtttcacgtatagaagaa
ttatacgaggatgaaaattttccttcgcgtaaactggctgctttgttagcttccaaagta
tgcgtgtactattacttgggaatatacaaagaagcgttgaaatatgcgctgtacgctgaa
gaactttttgacgtcaagatccattcagaatattcagaaactatcgttgacaaagattgt
gaaagcgaagcaataacggatcccagattggaagcggttatcaatcgcatgtttgatcgg
tgctttgctgaatgtgaatttaagcagatagttggaatagcgttagaaactcgtcgcatc
gacatgctgaacaaggcattgattgaatcggaagatactgttgaacttgcagcttattgt
gcaaagtgcgctgttcagtttgtccagaatcgaacgtaccgtaatgaagttttccaccat
cttgtggaattgtgttcatccagtcctctgcttgattacaatacgttatgtcaagaatct
gttttggctgcttatcaaatagcatttgatttgttcgattctgcttctcagcaatattta
accggtatgctgaaatgcatttcaccttctgaagtggaggagaagagcgacgaaacaaat
gtggaaaattctgattcaaagaataaaacgaaagaggagaaagagaagagtgaagaagag
ttgaagcttgaaccgttgagacgcattttgtctggagaattgacaatttttacccatatg
caatttcttattaaaaacaaccgtgcggatttgcaaattttgaaaaatatcaaagatact
gtgcgcagtagcgtttgccacactgctactgtcattgctaatggcatcatgtattgtggg
actacttgcgatgattttttgagaaataatgtcgattgggtcagcaaagcaaataattgg
tccaaattttccgcggttgccagtttaggggtgatacacaagggtcacgaaaccgaagcg
actcgtctgttggaatcatatttaccaaaagatgtagtcagtgccacttccagtggatat
ctggaagctggtggcttttacgcgttgggcttgattcacgcaggtcatggaaacgaaaca
ctgtttgcacgtttgcagcgtgaattgaattcaaccaacaacgaagtacttcgacatggc
ctttgtttaggctttggcgtcgcagcactcggttcattgcgtgctgatttgtgcgacgac
ctgcggactatattatttcaagacgaagccgtagccgccgaagcagccggcattggtata
ggattgattttggctggttcgttggattacgaggttttcaaagaaatgtatatgtgtgcc
actgatacgcagcacgagaagattcaacgtgggatctgcgtcggcattgcgtgcattgct
tttggtcgaatggaacaggcgaacagttgggcggatgaattgttgaaagatcaaaatccg
attcttcgtcgagctggagtttacacgttggcaatggcatactgtggttcaggcaacacg
aacgtcgtcggtcgtttgttgcatctttctgtaagtgacgtcaacgacgacgtccgtcgt
gctgcggtttcttcgatcggctttgtcatgtctagaaatccaactgcatgcccacagttg
gtatctttgttgatggaaagttacaatccaaatttgcgctacggggctgctatcgcgttg
ggtgtgtcttgcatagctagcggcttgcgtgaggcgatagctctgctggagccgatgtta
gacgatactgtcaattatgttcgtcagggtgcattgattgcaatggctatggtactgatg
cagcataacgaatgcaccgcaccgaaagtgaaagattttcgtgaaaaactgatgaaaatc
atcggcgataagcatgaagatgtgatttcaaagtttggtgcaatcattgcgcagggtctt
ctggatgcaggaggtcgaaacgttaccgtgaaccttattggtcgcaatgaaaatgtgtcg
atgataacggcaattggtcttcttgtctttttgcaaagttggtattggtttccgttggct
catttcatctcgttggctctgcagccgagctgtttgatcggtttgaacagtgatttgaag
atgccgaacatgaccttcatatcgaatgctaaaccgtctacttatgcttatccgcctccg
atagttgaaaagcaggccaaaaatcctgagaaggtggttgctgcagtgttgtcttatact
cacaaatcaagacgtcgagaccgtgagaagcaagcaaaacagcaagaacaagaagaaaag
atggatgtggatgaggcggcagtaaacaaaaacaaggataaggatgtccctgacgcagcg
gcaaccgctactcaggcggcgcctgctattcccgttgaaagcagtacaccagccgtggag
aatgttccatcggtggataacaagttgaaagtgatgacaatgcctgatgacagcaatttt
ataccaattaaaccaataacacatggtggtattatcttgatgaacgagaaaagtgccgaa
gtggcagtcgattttgttgaagtagttaaagctaatgtggctcttggcgatgaagaggcg
gaaccaacagcaccgtcgccgtttgattatttcatagaaaatgaatcaaatggtcaaaat
caagaacaaactcaaacggacactacatccgccgcaacacagtag
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