Trichinella spiralis: Tsp_04055 Help Entry Tsp_04055         CDS       T01609                                  Name (RefSeq) putative HECT-domain protein Organism tsp  Trichinella spiralis SSDB OrthologParalogGFIT Motif Pfam:  HECT MLLE zf-UBR Ank_2 Motif Other DBs NCBI-GeneID:  10904474 NCBI-ProteinID:  XP_003374869 LinkDB All DBs Position Unknown AA seq 2268 aa AA seqDB search MPIKETTAGTFGVFCLIYLVIRCILCFGVNFRKKDATAGGGGATGCSTVPASNTGRGSGG PSNNSTGGGGNNDSNAVEYVCYVNKYVFFVSEELISLLDTGLQGEQANVIINAESLYGDD FLSFPFRRRVFEKAAESGHKKTNDGAGKEPSNEESVPPPPRYTISLSPKKMFFKWTADEE SDGEGKRFRAIGAMHSDLLAVTADGVLYRWAWNQKQPSPNPHPAWETICNKEPIESISCS SVRTTVLTTHRRVASFVDESLDLISNALSTGLHSLPEPIVDVYSCDLYSCAMTKSGNVYW WGVLPSVQRMKVLDAIKNKLKKEVASEAKDITVGRLVMQNLVRMQHGPMFQADALGFTLV NGYPQVVILMESVWPNHDTARFQMLLPSSSVVSDPKRGLYNEGLESAVEDRSESFASSAQ LTAGNRKRKHALSAASSYREETLHLKDVVMVVENRNATIGKVVKVDGPYCAVLFADSNGV INDTADDAMNRSRLLRKEDLRVVPKVQCFSSTLEYIQKEPKKFYNLSDDHFILDVAVEPT GIWYLHQLLSRVLLSKINFSVTSRLYEDMLSLKLNCGRNVLHVAVSMSIAATNKENFSLS LSSSMAASENPSGGRATSDGRWEAVNSPSRINVTVSLNSMMQLGRRFVDPTGMSSHVLRG YALRSEASTQSAASRWAMEMAVEAAAAAAGIVPVTAGTTTIASQSGNPPSTTSMGVDDEM MVPVALDLATLKPRALTNSNERQRAAFEIVKLLTGNLVANTELFQLLSQCDHNGMTPFMY AVDCRSYHVAEIMLLSLKRIIRSFSVPNQNRAMMSVVFPVNTRPEFSPLYMLCCNDTCSF TWTGSEHVNQDIFECITCGLVGSLCCCTECAYVCHRNHECRLKRTSPTAYCDCWEKCKCK SLVAGNLDIRFELFRNLVNCQCLYSVLNDKNVNMSESRFYLISQDGVSFLDRFVYLLLTK LPIGCFDALVRLLSTECKLTSKADKNLAVLPRFARSVVRMFVLLNVSPQYSNCRKNQPLS RCRKIFHAILPHAVRELITTADGILAPVRLGMVKPCEPFTMANCTDPLELIEKMVMEDPV LLPNDVDREEEKKFLVDERDILASSPIVVNSLPKRTRSEVSSYMQDLATLTGEEATSDND TDSEADETMQETEGNATAGSDAGNDDSSVDVAMSPPLEAMPTLHVVEIPAEADSDHEGSQ ASGRHARRVSNADQDTDYSYTEVESNSSVSEESDVMFDENNQEDTDTEGSNFAWSGRIRD RKKGAKPTTSPEKLSTSTVHITNLLSRLFSMLIREALDLLLYGYSSEQSSMASRSSSTFY VPKRLLAELLPTWNWLFPLLDYLDSHLRFSAAMSNIVGPKKRQAAAKSHMSDIAGEGDAA QTSGDKSTIENLSNSVRDMSKDFPTNSCCDLLFIRSDSMVYPGLFPVKSAFEHSVPESIP LCNRPHMLQASSSKESLYGLPPSYDKWSEHLRTQLQMGNEAPGSSSLTRNMSHKTRLTLA SFAPLDDTAADREISKSSPKRFRRERRSKSVIVHSSEAASPKSAEDTITAIVNSALVRWE DQQMLMSRWKLVLTTFAKMFADEQMLTTGGSIFTQLSGFGPKAARFRKAMERIRNTSKDL QFMVDRDRPMLLRETFQVLNAFFERRQMGNSSQHHVIGVHRVKVSFKDEPGEGSGVARSF FTAIASAILSPLPLPNFELSPLPTTALGMNTIGSPSAATPMPPTRQRLGLRSRGRSKDNS RRPLFTMPVGWLEGTIGASPFFPTVSAPEVAGPLDENNVQAMGNRIYMKVNSMFPRYAAK VTGMLLEVPTHQLIVMLTHEATLEHLAQNAYEVLLTWVQSSGGNPGDFMPGGPLPSASTQ STVMPSTVATAQPANTAAVTTTIATASTASASVSASQVSPGPVAGAAAATSMAAVDTSSS AASSGGTTSTVSSATGAAIPSTVTTYDSRWLSCPDLPRLLENVADVKDDRPLFFKPGNGM FYAPVAGAESPSRLNAYRNVGRLIGIALSQNEIFPLPLCRSVFKFILRRPITWYDMAFYD CYMYEKLHKLVTGEYAAEDLDLNFTITLDAIEGGNTVELLSNGTNVAVTSENVVKYVFLY AQHRLYKLVQSALTNIRDGVRDVIPVSMLDTINAEDFRLLLTGQSDVNVKFLKKLTVITD ESSSAAADKSLPREKFDQFKKWFWSVVSSMTADEKQDLIYFWTGSPTLPPTMEGFMPTPN VVIRPPDDMYLPTANTCISRLYIPLYSSKNILRQKLLFAIKIKTFGFV NT seq 6807 nt NT seq  +upstreamnt  +downstreamnt atgccaataaaggaaacgacagcgggtacgtttggtgttttttgtttaatttatttggtg attcgttgcattttatgttttggcgttaattttagaaagaaagatgctactgcaggtggt ggtggcgcgactggttgctctacggtaccagcttcgaatactggcaggggttctggtgga cccagcaataacagcaccggcggcggagggaataatgactctaacgctgtagaatatgta tgttatgtaaataaatatgttttttttgtatcagaggaactgatttctcttttggatact ggtttacaaggagaacaggcaaatgtaattatcaacgcagagtctttgtatggtgatgat tttttgagtttcccgtttcgtcggcgtgttttcgaaaaggctgcagaaagtggacacaaa aaaacaaatgatggtgctggtaaagagccctctaatgaagagtccgttcctcctcctccg aggtatacaatttcattgtccccaaagaagatgttcttcaaatggactgcggacgaagaa tcggatggggaagggaagcgttttcgtgcgattggcgctatgcattctgacttgcttgct gtcaccgcggacggtgtattgtatcgttgggcttggaatcagaagcaaccatcgccgaat ccgcatcctgcatgggagactatttgcaacaaggaaccaattgaatctatttcttgcagc agtgttcgcactactgttttgacaactcatcgcagagtggctagttttgtcgacgagtcg ttggatttaataagcaatgctttgtccactggtttgcacagtctgccagagccaattgtc gatgtgtactcctgcgatttatattcttgtgccatgacaaaatctggaaatgtttattgg tggggtgttttgccgtcagtgcaaagaatgaaagttttggacgcaataaaaaataaactg aagaaagaagttgcatctgaggcgaaggatatcacagttggtcgcttggtaatgcaaaat ttggtaagaatgcagcacggtcctatgtttcaagccgatgcgttgggttttacacttgtt aacggatatccacaagttgtaattttaatggaatccgtttggccaaaccacgatacagct cgttttcagatgcttttgccctcaagttcagttgtttcggatccgaaaagagggttatac aacgaagggttagaatcggcggtggaagatagatcagaatcttttgcttcatccgcccaa ttgactgctggaaatcgtaaaagaaagcatgcactttctgcggcaagcagctacagagaa gaaactctgcatttgaaagacgtagtcatggtggttgaaaatcgaaatgcaactattggc aaagtagtgaaagtcgacggaccgtattgcgcagttctgtttgcggacagtaatggcgtg ataaacgatactgctgatgacgcaatgaatcgaagccgtctacttcgcaaagaagatttg cgagtggttccaaaggttcaatgtttttcttctacactggagtacattcaaaaagagcca aagaagttttacaatctttccgatgatcactttattttggatgtggcagttgagcctacc ggcatttggtatttgcatcaacttcttagtcgagtgctgttatcaaaaattaatttctct gtaacaagtcgtttgtatgaagatatgctatcattgaaattgaactgtggtcgaaatgtg ctgcacgttgcggtgtcgatgtccattgcggcgacaaacaaagagaatttcagtttgtca ttgtcgtcgtcgatggcggccagtgaaaatccttctggaggtcgtgcaacttcggacgga aggtgggaggcggtgaattcacccagccgaatcaacgttacggtcagcttgaacagcatg atgcagcttggccggaggttcgtcgatccgacgggcatgtcgtcgcacgtgttacgggga tatgctcttcgttcggaggccagcacgcagagtgccgcttccaggtgggcgatggagatg gccgtcgaagcggccgcggctgctgcgggcattgtccctgttactgcgggcacaaccacg atcgcttcacagagcggcaacccgccctcgacaacctctatgggtgttgacgatgaaatg atggttccagtagctttagatttggccacgttgaagcccagagcgttgactaattcgaat gagcgtcaaagggctgcgtttgaaattgtgaaattgctcactggaaatttggtcgccaac actgaactatttcaattgctttctcagtgtgatcacaacggtatgactccatttatgtac gctgtcgactgtcgcagttatcacgtggctgaaataatgttgttgagcttgaaacgcatc attcgtagcttttctgtgccgaatcaaaacagagcgatgatgtcggttgtttttcccgtc aacactaggcctgaattttcgccgctgtatatgctttgctgcaacgacacttgcagcttt acctggaccggtagtgagcatgtcaatcaggacatttttgaatgtatcacgtgcggtttg gtcggctcgttgtgttgttgcaccgaatgtgcgtacgtttgtcatcggaatcacgagtgc agattgaagcgtacttcgccgaccgcatattgcgattgttgggaaaaatgcaaatgcaaa tcgctggttgcgggcaatctggacatccgttttgaacttttcagaaatctcgtcaattgt caatgtctctacagtgttctgaacgacaaaaatgtaaatatgagcgaaagtcgattttat ttgatatcccaagatggagtttcgtttttggatcgttttgtttacctgctgttgacgaag ttgcctattgggtgcttcgatgcgttggtgcgacttttgtccacggaatgcaagttgacg tccaaagcagacaagaatttggccgttttgccccgcttcgctcgatccgtggtacgcatg tttgtgctgttgaacgtgtcgccccagtattcgaattgccgcaagaatcaaccgctgagt cgttgtcgaaaaatatttcacgctattttaccgcacgctgtgcgcgagttgatcaccacc gccgacggtattttggccccggtgcgattgggcatggtgaaaccgtgcgaaccgttcacc atggccaactgtaccgatccgctggaattgatagagaagatggttatggaagatccggtg ctgcttcccaacgatgtggacagagaggaggagaagaaatttctcgtcgacgaacgcgac atccttgccagcagtccaattgtggtgaactctctgcccaagaggacacgttcagaggtg tcgtcttacatgcaagatttggccactttgactggcgaagaagcgaccagcgacaacgac accgattccgaagcagacgagacgatgcaagagaccgaaggcaatgcgaccgccggttcc gacgccggaaacgacgactcttctgtcgacgtggcaatgtcgccgccgttggaggcgatg cccacgctgcatgtggtggaaattcccgccgaagccgactcggatcacgaaggcagccag gcgtctggccgacatgcgcgtcgtgtcagcaacgccgaccaagataccgactattcgtac actgaagtcgaatccaattcgagcgtatccgaagaatcggatgttatgttcgacgaaaat aaccaagaagacaccgacaccgaagggtcgaattttgcttggtccggccgaattcgagat cgcaagaaaggcgccaaaccgaccacatccccggaaaaattgtcaacttccaccgtacat ataacgaatttgttgtcgcgcttgttttcaatgttgattcgcgaagcgttggatttgctt ttgtacggttattcttcggagcagtcgtcgatggcgagccgtagcagctcgactttttac gtccccaagcgtctacttgctgaattgttgccgacgtggaactggctatttccgctactc gattatttggattcgcatttacgattttctgccgccatgtcgaatatagttggtccaaaa aagcgtcaagcggcggccaaatctcacatgtccgacattgctggtgaaggtgatgcagcg caaacctcgggcgacaagtcaactatagaaaatttatcaaactccgtacgagatatgtcc aaagattttcctaccaattcctgttgtgatcttctttttatacgttctgattctatggtt tatcctggtttatttccggtgaagtctgcattcgagcacagtgtgcccgaaagcataccg ttgtgcaaccggccgcacatgttgcaggcaagctccagcaaggagtcgttgtacggattg cccccatcctatgacaaatggagtgaacacctgagaacccagttgcaaatgggaaacgaa gctccgggttcgagtagtcttactagaaacatgtcgcacaaaacgcgtcttacattagcg tcattcgctccattggatgacactgctgctgatcgagaaatttcaaagtccagtccaaaa cgattccgtcgtgaacgcagatccaaaagtgttattgtccattcgagcgaagcagcttcg cctaaaagtgccgaagataccatcaccgctattgtaaattcagctctggttcgttgggaa gatcagcagatgttgatgagtcgttggaagctggtgttgacgacgttcgcgaaaatgttc gccgatgaacaaatgttgacaaccggcggttcaatattcactcaactttctggttttgga ccaaaggcggctcgttttcgcaaggcgatggaacgcattcgaaatacatctaaggatttg cagttcatggttgatcgtgataggcctatgcttttgcgcgaaacgtttcaagtgttgaat gctttttttgaacgtcgccagatgggcaacagttcacagcatcacgtcataggcgtgcac cgcgtcaaggtgagcttcaaagatgagcccggagaaggttccggagtggcaagatcattc ttcaccgccatcgcgtctgccatattgtcgcctttgccgttgcccaattttgaattgtca ccactaccaaccacagcgttgggaatgaatacaataggtagcccgtccgctgcaacacca atgcctccaactagacaaagattgggtttgcgcagtcgaggcagatcgaaagacaacagt cgacgaccgttgttcactatgcctgtaggatggcttgaagggacaattggtgcttcgcca tttttccccactgtatctgctccggaggtggcaggaccgctggatgagaacaacgtgcaa gctatgggcaatcgaatttacatgaaagtgaactctatgtttccgagatacgcagcaaaa gtgaccggcatgttgctcgaagtgccgactcaccagttgatagtaatgctcacccacgag gcgacactggaacatcttgcacagaatgcttacgaagtattgttgacttgggttcagagc agtggtggaaatccaggagatttcatgcctggaggcccgttacccagtgcttcgactcag tcgacggttatgccgtcgactgtggcgaccgctcagcctgctaacaccgccgcagttact actaccatcgctacggccagtaccgcttcggcatcggtttccgcttctcaagtatcgcca ggtccagtagccggtgctgctgcagcaacaagcatggctgccgtcgacacgtcgtcgtcg gctgcatcatcgggcggaaccacgtcaaccgtttcctctgcaaccggcgccgctattcca tcgaccgtcactacttacgactcgagatggttatcttgtccagatctgcctcgactgttg gagaacgttgcagacgtgaaagacgatcgtccgttgtttttcaaacctggcaatggtatg ttctacgcgccggtcgccggtgccgaatcacccagccgtctgaacgcgtatcgtaacgtt ggcagattgattggaattgcactgtcgcagaatgaaatatttccactaccactttgtcgt tcagttttcaaattcattctgcgacgaccgatcacttggtacgacatggcattttacgat tgctacatgtacgaaaagttgcacaaacttgtcactggtgaatacgcggctgaagatttg gatttgaattttaccattacactggatgcaattgaaggaggcaatacggttgaattgttg agcaacggtacaaatgtggcagtgacttcagaaaacgtagtgaagtatgtgttcttgtat gcgcagcatcgactttacaaacttgttcaatcggctcttactaacatccgagacggcgta cgtgatgttataccagttagcatgctcgacacaatcaatgcggaggattttcgactcttg cttacaggccagagtgacgtcaatgtgaaatttttgaaaaagttgaccgtgattactgac gaaagtagcagcgctgcggcggacaagtcgttacccagagaaaagtttgatcagtttaaa aaatggttctggtctgtagtgagctccatgacggcagatgaaaagcaggatttgatctat ttttggacaggaagcccgactttgccccctacaatggaaggttttatgccgacaccgaac gttgttattcgcccaccggatgacatgtatttaccgacggcgaatacgtgcatttcgcgt ctctacatcccgttgtattcaagcaagaatattctgcgacagaaactgttgttcgcgatt aagatcaaaacgtttggcttcgtataa

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