Trichinella spiralis: Tsp_04066 Help Entry Tsp_04066         CDS       T01609                                  Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism tsp  Trichinella spiralis Pathway tsp04382   Cornified envelope formation tsp04512   ECM-receptor interaction tsp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tsp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     Tsp_04066  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     Tsp_04066  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     Tsp_04066  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tsp04147]     Tsp_04066    00536 Glycosaminoglycan binding proteins [BR:tsp00536]     Tsp_04066 Exosome [BR:tsp04147]  Exosomal proteins   Exosomal proteins of other cancer cells    Tsp_04066 Glycosaminoglycan binding proteins [BR:tsp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    Tsp_04066 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  10904486 NCBI-ProteinID:  XP_003374879 LinkDB All DBs Position Unknown AA seq 1632 aa AA seqDB search MFVNKLAALNDFSFSFSEQSPICRDCANRNCFCIGEKGSLGPPGPQGVTGVKGLPGFPGP EGLPGPKGEKGEPGPSGPMGPKGDRGVQGPPGPMGRPGYDGCNGTDGSPGLPGSVGPPGP PGFPGAPGIKGMKGEPALAFPGMKGEKGAPGSPGPPGPPGNPGIGAIGMKGEPGDPGLPG PPGPPGLGEFTDTKGAIMGPPGIPGQKGEKGDPGQTGERGFPGEAGRHGKEGRPGLPGPH GMKGDRGLDGYPGLDGVQGRDGEKGSQGPPGPPGGGLVGNGAPGDRGPPGRPGPIGPPGS DGSPGWPGPPGPQGERGGPGLPGLPGREGAPGIKGEKGDAGLPGIPGERGPTGYPGQMGP KGEPGMSGVPGQSIPGPPGKDGLPGLNGLPGKKGEAGPPGPRGMPGDSIHGLPGPPGPMG PKGDKGYDGRDGSPGLPGLPGSKGDRGGSCDFCRPAFPVFKEKKAYPVSEVLQVLPEKMA FQVLQGPPGLPGKDGEKGAKGDSFRADLVYGPPGPVGPKGDPGYPGIPGEKGISGLPGQP GLPGAPGALGAKGEPGLPGIPGRPGKDGPTGFPGQKGEPGYGLPGLPGLAGAKGEAGFPG LPGSPGLPGPPGPLPKVLDRIPGPPGADGLPGLPGPKGEPGFPGMKGERGAPGLMGLPGP KGSTGAPGPEGQMGAPGIRGEKGESGFPGAPGLPGPPGKDGLPGLPGRTGEKGEQGVSVP GLPGPPGFPGFKGEPGLSGAPGMPGLKGRMGVPGIRGEKGEPGAAGLPGVPGLPGLKGDQ GFPGIPGKEGLPGAPGLPGTPGFQGLKGESGLPGIPGPAGLKGEPGMPGLPGSPGTVGAP GFPGPKGNPGFPGLAGPKGDIGLPGLEGFPGQKGQRGLDGQPGYPGEKGDQGLPGLPGKP GLDGLPGIKGDRGFPGLPGDKGEPGPAARDGPRGEKGMPGLPGLRGLPGPPGPTGPPGFP GPKGDAGVGLPGYPGPKGEPGFPGAPGLSGIPGPKGSMGLPGFPGEKGDAGYPGAPGAPG VKGLDGFPGQKGEPGFPGLAGPPGLPGEKGRMGVPGIRGEKGLDGLPGRPGQPGAAGFPG EKGDAGLPGMPGAPGFTGAKGDAGFPGLPGAKGDRGLPGLDGFPGQAGQKGEPGLPGLPG QQGQDGFPGPKGERGLDGLPGAPGIGYKGERGEPGLPGLPGKGLPGFPGTKGERGLDGLP GLPGPKGAPGYPGTPGQKGEPGLPGLPGERGRDGFPGPKGDAGLPGLPGAIGEPGYPGID GKPGLPGIPGAKGMAGIPGFPGLKGDPGLPGSPGAPGFPGTKGDAGFPGMPGVPGSKGDK GQMGPMGPPGPSPIVQPGPPGLPGERGPPGLPGLPGPPGMDGLPGFPGQKGEPGAMGSDG FPGPPGFPGMKGEPGYPGPPGMAGGKGEPGLPGMPGSPGPPGPSYRDGFIIVRHSQTSEL PQCISGYEKLWEGYSLLYIEGNEKSHNQDLGSAGSCLTRFSTMPFLFCDFNNVCNYASRN DKSYWLSTTEAIPMMPVAEREIEQYISRCVVCEAPANVIAVHSQTTQVPDCPQGWTGLWI GYSFAMHTAAGAEGGGQSLSSPGSCLEDFRSTPFIECNGARGTCHYFANKFSFWLTTIED QQQFIVKNVFLN NT seq 4899 nt NT seq  +upstreamnt  +downstreamnt atgtttgtcaacaagctagcagctcttaatgatttctctttcagcttctctgagcaatct ccaatatgtcgcgactgtgccaatcgaaactgcttttgcattggcgaaaaaggaagtctg ggtccccctggaccgcaaggagtaactggagtcaagggattaccgggctttcctggacca gaaggtttgcctggaccaaagggtgagaaaggtgagcctggtccttcaggtccaatgggc ccaaaaggggatcgaggcgttcaaggaccacctggaccaatgggacgacctggatatgac ggttgcaatggaactgatggcagtcctggattgccgggatcagtcggcccaccaggacca ccaggatttcccggagctccaggaattaaaggcatgaaaggagaacctgcattagctttt cctggaatgaaaggtgaaaagggagcacctggttcacctggaccacccggacctcctgga aaccctggaataggtgcaataggaatgaaaggagaaccgggtgatcctggattgcctgga ccgcctggacctccagggttgggcgaattcacggacacaaaaggagcaatcatgggtccc cctggaattcctggtcaaaaaggcgagaaaggagatcctgggcaaactggagagcgtggc ttccctggtgaagctggacgtcacggaaaagaaggacgacccggactgcctggtccacat ggaatgaaaggagatcgcggcttagacggatatcccggattagatggagtgcaggggaga gatggcgaaaaaggttcccaaggaccgcctggtccaccaggaggaggtttagttggaaac ggcgctccaggggatcgaggtccgccaggaaggcctggaccgataggtccaccaggatca gatggatcgccaggttggcccggaccaccgggaccacaaggagaacgcggtggtcctggt ctaccaggtttgcctggtcgagaaggcgcacctggcatcaaaggtgaaaaaggtgacgct ggtttacctggcattccaggcgaacgtggccctacaggctatcctggacaaatgggtcca aaaggtgagcccggaatgtctggcgtgcctggacaaagtatacctggacctcctggcaaa gatggtttgcctggtttgaatggactgcctggaaaaaaaggagaagccggaccgcctgga ccgagaggaatgccaggcgattccatccatggccttccgggtccaccggggccgatgggt cctaaaggagataaaggttacgacggaagagatggaagccccggattgcctggtcttcct ggttcaaagggagatcgtggtggctcttgtgacttctgtcgtccagctttcccggtcttc aaggagaaaaaggcttacccggtctcagaggtcctccaggtgctcccggagaagatggct ttccaggtcctccagggaccaccaggcttgccaggaaaagatggtgagaaaggtgcaaaa ggtgactcgtttcgtgcagatctcgtttacggacctccaggtcctgtaggacctaaaggt gatcctggataccctggaatcccaggagaaaaaggaatcagcggtctgcctggtcaacca ggactacctggtgctcctggcgcattgggcgcaaagggcgaacctggtcttcccggaatt ccagggcgacccggaaaagacggtcctacaggttttccaggccaaaaaggtgaacctggc tatggattgccaggcttaccaggtctagcgggggcaaagggcgaggccggtttccctggt cttcctggttcacctggattgccaggaccacctggacctctcccaaaagtattggatcgg attcctggaccaccaggtgccgacggtttgcccggtctacccggaccgaaaggagagcca ggtttcccaggaatgaaaggtgaacgcggtgcgcctggattgatgggcttacctggtccg aaaggtagtaccggagctcctggtcctgaaggacaaatgggtgctccaggtattcgaggt gagaaaggagaatctggttttcctggcgctcctggactacccgggcctccaggaaaagat ggacttcctggtttgcctggacgtactggagaaaaaggagaacaaggcgtatctgttcca ggattgcctggcccacctggttttcctggtttcaaaggcgaacctggattgagtggagcg ccaggaatgccagggctgaaaggaaggatgggtgtacccggcattcgaggtgaaaaagga gaacctggcgcagctggcttacctggcgttccaggtttacctgggctaaaaggagatcaa ggctttccaggaattcctggtaaagaaggactacctggtgctccaggtcttcccggcact cctggcttccaaggactgaaaggagaaagcggtttgcctggtatacctggccctgctgga ctaaaaggtgaaccaggcatgcctggcctgcccggaagccctggaactgtgggtgctcct ggtttccccggcccgaaaggaaatcctggatttcccggtttggctggaccaaaaggtgac attggattgcccggattggaaggatttcctggccaaaaaggtcaaagaggattggacggt caaccaggttacccgggagaaaaaggtgatcaaggtctacctggtttaccaggcaagcct ggtttggatggcctgcctggcataaaaggagaccgcggtttcccaggtcttcctggagac aaaggtgaacctggtccagctgcaagagatggtcccagaggagagaaaggtatgcctgga ctgccaggtttgcgcggcttacctggcccgcctgggcccaccggacctccaggatttcct ggaccaaaaggtgatgctggcgtcggtctacctggatacccgggacccaaaggtgaacct ggttttccgggtgcgcctggcctttcaggaataccaggaccaaaaggatccatgggactt cctggattccctggtgaaaaaggggatgctggttaccctggtgcccccggagctcctgga gtcaaaggattagacggatttcctggccagaaaggtgaacctggttttcctggactggct ggtcctccaggcttacctggagaaaaaggaagaatgggcgttcctggtattcgtggagag aaaggtcttgacggtttgcccggacgaccaggtcaaccaggagcggctggttttccagga gaaaagggcgacgctggtcttcctggtatgcctggtgctcctggatttacaggagcaaaa ggagacgctggttttcctggtttgcctggtgcaaagggtgatcgaggtttgccaggcttg gacggattcccaggacaagcagggcagaaaggcgagcctggcttgcctgggcttcctggt cagcaaggtcaagatggttttcctggaccaaaaggagaacgtggcttggacggcttacca ggtgctcctggaatcggctacaaaggagaacgtggtgaacctggacttccaggcttgcct ggaaaaggtttacctggttttcctggaacgaaaggtgaacgcggtctggacggtttgcca ggattacccggcccgaaaggagctcccggataccctggtacacctggacaaaaaggagag cctggattgcctggtttacctggagaacgcggtcgtgatggatttcccggacccaaaggt gatgctggacttccaggattgccaggagccattggtgagcctggttatcctggtattgat ggaaaacctggtttgccaggaatacctggagcgaaaggtatggctggtattcctggattt ccaggtttgaaaggtgatccgggattgccaggtagccccggtgcacccggatttcccgga acgaaaggtgatgctggatttcctggcatgcctggtgttcctggttccaaaggtgacaaa ggacaaatgggtccaatgggccctccaggtccatcgccaattgttcaaccaggaccgcca ggtcttccgggtgaacgaggtccaccaggcttacctggactgcctggccctcctggcatg gatggtttgcctggatttcccggacagaaaggtgaaccaggtgcaatgggaagcgatggc tttccaggaccgcctggatttccgggaatgaaaggagaaccaggctatcctggtcctcct ggtatggcaggaggtaaaggtgagcctggcttgcccggcatgccgggaagtcctggccct cctggtccaagctatcgtgatggatttatcatcgtgcgtcacagtcaaactagtgaactg cctcagtgcatcagtggctacgaaaaactgtgggaaggctattcattactttacatcgaa ggaaatgaaaaatcgcacaatcaagacttgggaagtgccggttcatgtttgacacgcttt tccacgatgcctttcttgttctgtgatttcaacaatgtttgcaattatgcatcgagaaat gacaaatcttattggctatcaactaccgaagcaataccgatgatgcctgttgcggaacgt gaaattgaacaatacatatccagatgtgttgtttgtgaagctccagccaatgtgattgca gttcactctcagacaacccaagttccagattgtccgcaaggttggactggtctatggata ggctacagcttcgcaatgcacacagctgccggagctgaaggtggtggccagtcgctcagc tcacccggctcttgtttggaagatttccgctcaacgccattcatcgaatgcaacggtgca cgtggcacttgccactattttgcaaacaaattttcattttggctaaccacaatcgaagat cagcaacagttcattgtaaaaaatgtttttttaaattaa

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