Trichinella spiralis: Tsp_04072
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Entry
Tsp_04072 CDS
T01609
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_04072
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Tsp_04072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
10904492
NCBI-ProteinID:
XP_003374885
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MNNLFRRSSVYSAYYIMNVRYFTLSAQQRSSTLTRSSFEEEAVDNEKIKDEKALKQKKNA
KSLRQGSKNRNVRSDDKSLKRKNNDKKTGVKRKNLRHNRKYAKAAFEKKEDVIPHYSSSV
NNVSTLPPYEDTDFKTKFGHVQYAAQRDKASFGILQAARSEILLPEEEGFLEADEGEQTY
HVTQHDIIESVDLASSSKYFELNLPKFGPYRLDFTRNGRNVLLGGQVGHVAAFDWLNKSL
KFEINVMEAVRDVQYCFTLVTDGKKAVGQYAVLCFMATVGADRIVKVWDLRNYGELHRLK
VPYSTSHMVFSQRGLLACSMGTFIRVYKDICKLSSAEPYMIHNCKEVVTDLRFCPFEDVL
GVGHRTGYCNLLIPGSGEANIDAFESNPFQSLQQRREMEVHSLLDKVWVMLFGK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcttttccgtagatcatccgtatatagcgcatattatattatgaacgtacgc
tattttacactttctgctcaacaaaggtcctctactttgaccagatcatcgttcgaggaa
gaagctgtagataatgagaaaatcaaagatgaaaaggcacttaagcagaagaaaaatgca
aagtctcttcgtcaaggtagcaaaaacagaaatgtaagaagtgatgataaatctttgaaa
aggaagaataatgacaagaaaactggcgttaaaaggaagaacttgcggcacaatcgcaaa
tatgctaaagctgcttttgagaaaaaggaagacgttattccacattatagcagttccgtg
aataatgtttctactcttccaccttatgaagatacggattttaaaacaaagtttggccat
gttcaatacgcagcccaacgtgacaaagcctcgtttggtattttacaagctgcccgatcg
gaaatattattacccgaagaagaaggatttttggaggctgacgaaggtgagcaaacttac
catgtcacacaacatgatatcattgaatcagtcgaccttgcaagctcttcaaagtatttt
gaactgaacctgccaaaatttggtccatatcggctggatttcactcgcaatggaaggaat
gtgttgctcggtggccaagttgggcatgtcgcggcatttgattggctcaataaatcattg
aagttcgaaattaatgttatggaagcagtcagagacgttcagtactgtttcactttggtc
accgacggtaaaaaagccgttggtcagtatgctgtgttatgtttcatggcaacagttggg
gcggatcggatagtcaaagtgtgggatttgagaaactacggagaattgcatcgcttgaaa
gttccttattcaactagccacatggtattcagtcaacgaggacttcttgcttgtagtatg
ggaacttttatcagggtgtacaaagatatttgtaagctctcgtcggctgaaccgtatatg
attcacaattgcaaagaagtggtgacagatttgcgattctgtccgttcgaagatgtactg
ggagttgggcaccggactggctattgtaacttgctcatacctggatccggcgaagcgaat
attgatgcatttgagtcgaatcctttccaatcgttgcaacaacgacgggagatggaagtg
cattctcttcttgacaaggtatgggtaatgttatttggaaaataa
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