Trichinella spiralis: Tsp_04127
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Entry
Tsp_04127 CDS
T01609
Name
(RefSeq) putative variant SH3 domain protein
KO
K04095
cell filamentation protein, protein adenylyltransferase [EC:
2.7.7.108
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_04127
Enzymes [BR:
tsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.108 protein adenylyltransferase
Tsp_04127
Chromosome and associated proteins [BR:
tsp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Tsp_04127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPS8_2nd
ATG8
Fic
SH3_1
SH3_2
TPR_14
APG12
SH3_9
hSH3
SAM_3
TPR_19
TPR_2
TPR_16
Motif
Other DBs
NCBI-GeneID:
10904711
NCBI-ProteinID:
XP_003374941
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MHIFQCVQVSASEVADDIKQFLRGRFKAVPTGRRISGFAMPSGGVEAGSPEMVTTDGTSL
LHGRSMFSRSDQRYFSQDRPRVSTVPVMMENGRSPSNFNYREVDQKSTFSDSSVVEFFER
DVNILNRCFDDIERFVARIQSAAIAQRELEALQQQRRAMKPSSSRSSQSRMPGEGILLMR
AQLPPELEFFDILQKFKLCFNLLAKLKNHIHEPNAPELLHFLFTPLAIILDACQWGFGRN
IAPQVVSPLISRAAKALLLNCLTSKESEIWASLGDAWRTTAEEWTGPSPGNYSPTFAHSY
GPYSTTTTGTTVPDHGGQAGRSNRNLLIDTQLAGDFGRVSLERERLDLEKEKLQEEERRI
QFEKRILEVCSCCCCTINYANERMLFDLIQEERRRLLEEKRQFYEEQEQRSVVSERLPRP
PPAAANGLYSSTMSRSRPDLYRETTLREQESRRHFSPPNVTDDASFFFEQARARGSQIAQ
VVYERHGMNEKELTVRKGEFLEVLNNKKNWWECRNAHRQVGFVPHTILSVVDSGIHHNST
PHQQSKSFDEPLFVRPPPPSTSTFGPAMGNSATAFGSYEDDSSARRSSPVTRTATPANNN
GDTPEVIRQRRDEPKNKEVMMFSSTCLVNSKRPYVACAPPVPPPAPPPPPPPLPRTSGGV
EAVSSTGEKKASTSNGTIPHGMLNEELLMTLNKSNLKGSFDFKAKPLPNSSLVTVQEMSS
MSTKQDVAEWLQAKCFSGSYNWYTLAVLVLLVAVIAYQTLHLLNNNNRSWLSDYLLHCFK
SNQKNVSKYLSREVAFYLSSFDMPSPVEDTSVLQSSLVPAKGKKYTFLLLHVLLLCQYAE
QVGISGTESEALAVLQAAELFLKSGKVDKARKLFEHAVFLQPQHPDILTGYGLFTEKIGG
DVVKANFMFSRALIYSPDHSLAKWHKGRTQPIVQEIDAEMMRILDQKRNKFLRIPRGSSG
LRRAMREAYFSHIYHTVAMEGNTMNFVQTKSLLETRMAIGGKSILEHNEILGMDAALRFV
NQSLIHRIGSLSVEDILDIHRRVLGFVDPVESGRFRTHQVYIGSFEPSLPENSTFAVEIL
ICRRSFLYCCRISVEKEVDELLEWLNSDTAMSIHPVELAALLHYKFVVIHPFVDGNGRTS
RLLMNLILMQAGFPPVIIRVEDRLQYYESLKLANEGDLRPFVRFIAECTRRTLDEYLANS
MCSVDEASNPLEPIVDNGRTIIIVIERFEGEKYLPVLDRCKFLVPDHVTMTELMQIVRRR
LELHPEQALFLLVNEKSLVSHSTTLAELYEAEKDTDGFLYIVYTSQPGFG
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgcacatttttcaatgcgtccaagtgtcggctagtgaggtcgcggatgatatcaaacaa
tttttacgcggacgcttcaaagcagtaccaacagggagaagaataagcgggtttgcaatg
ccaagtggaggagtagaggctggtagtcctgagatggttaccactgacggcacaagcctg
ctgcatggccggtcgatgttcagtcgttcggaccagcgttatttcagccaagatcgaccg
cgggtcagtactgttcccgtgatgatggaaaatggccggtcgccttcgaatttcaattac
cgggaagtggaccagaagtcgaccttttccgattcgtctgtggtcgaatttttcgaacgg
gacgtgaacatactgaaccggtgcttcgatgatatcgagcgtttcgtcgcccggatccag
tcggccgccatcgcccaacgtgaattggaagcgctgcaacagcagaggcgggcgatgaag
ccgtcgtcgtcccggtcttcgcagagtcgtatgcccggcgaggggattctgcttatgcgt
gcccaactgccacccgaattggaatttttcgacattttgcaaaaattcaaattgtgcttc
aacttgttggccaaattgaagaaccacatccacgagccgaacgcgcccgaactgctccac
ttcctgttcacacctctggcaattatactggacgcttgccagtggggttttggtcgaaat
attgcaccgcaggttgtgtcgccgttgatcagccgagctgccaaggcgttgctgttgaac
tgtctgacgagcaaagagtcggaaatttgggcttctttgggcgacgcttggcgcactact
gctgaagaatggaccggcccgtcgcctggcaactattcgccgacatttgctcacagttat
ggaccatattccaccaccaccaccggcaccactgtgcccgatcatggtggacaagctggt
cgttcgaatcgaaatttgctaattgatacccagttggctggcgattttggtcgcgtatct
ttggaacgggaacggctcgacttggaaaaggaaaagttgcaagaagaggagcgtcgaatt
caatttgaaaaacgaattttggaggtctgttcttgttgttgttgtacaattaattatgca
aatgagcgaatgttgttcgatttgattcaggaagaacgacgtcgcttgcttgaagagaag
cgtcaattttatgaagaacaagagcaacgatctgtcgtttccgaacgtttgccacgtcca
ccacctgcggccgctaacggtctctattcgtcgacgatgtccagatctagacccgattta
tacagagaaacaacattacgtgaacaagaatctcgacgtcatttttcaccacccaatgtg
acagatgacgcgagcttttttttcgaacaagcacgagctcgtggctctcagattgcccaa
gtggtctacgaacgacatggtatgaatgaaaaagagttgaccgtcagaaagggtgaattt
ttggaggttttgaataataagaaaaattggtgggaatgtcgcaacgcacatcgacaggtc
ggttttgttccgcatacaattttgagtgttgtcgattcgggaattcaccacaattcgact
ccacaccagcagtcgaagtcgttcgacgagccgctttttgtgcgtccaccgcctccgtcc
acttccaccttcggtccggctatgggcaattcggccactgcttttggctcttatgaggat
gattcttctgcaagacgatcaagtcccgttacgagaacagccacaccggctaacaacaac
ggtgatacgccggaagtgatacgacaacgtcgcgatgagcccaagaataaagaagtgatg
atgttttcgtcgacttgcttggtcaattccaaacgtccgtatgttgcttgtgctcctcca
gtacctccgccggcaccgcctccacctccacctccgctgccgcgtacatccggtggtgtc
gaagctgtgtcgtcgactggtgagaaaaaagcttcaacatcaaatggaacaattccgcac
ggaatgctcaacgaagaattactgatgacgttgaataaatccaacttgaaaggaagcttt
gattttaaagccaaacctttgccaaattcatcgttggtcactgttcaagaaatgtccagt
atgagtactaaacaagacgtagccgaatggttgcaagccaagtgtttcagtggcagctac
aactggtacacgctggctgtattagttttgctcgtagccgtaatcgcttatcagactttg
cacttgttgaataacaacaatcgcagttggttatccgattatttgttgcattgctttaaa
agtaatcagaaaaatgtttcgaaatatttgtctcgagaagtagccttttatctttcttca
tttgacatgccttcgccggtggaagatacttctgtattgcagtccagtctagtacctgcc
aaaggtaaaaagtatacgtttttgcttttgcacgttctcttactttgccagtatgctgag
caggttggcatttcaggcactgaatcagaagcgttggcggtactacaagcagctgagctg
tttttgaaatctggtaaagtggataaagctcgtaaactttttgaacatgcagtttttctc
cagccacaacatcccgacattttaactggctatggcttgtttacggagaaaattggtggc
gatgttgttaaagcgaattttatgttcagccgtgctttgatctattcccctgatcattca
ttggcgaaatggcacaaaggacgaacacagccaattgttcaagaaatcgacgcggaaatg
atgcgcattttagatcaaaagcgcaacaagtttttgaggataccacgaggaagtagtggc
cttcgtcgtgcaatgagagaagcatactttagtcacatttatcatactgtcgccatggaa
gggaatacgatgaattttgtccaaacgaaatcgttgttagaaactcgtatggctatcggt
ggaaaaagcattttggagcataatgaaattctcggcatggacgcagcacttcggtttgta
aatcagagtttaattcatcgaattggatcgctctcggtcgaagacattttggatattcac
agacgggtattgggtttcgtcgatccagtcgagagtggacgttttcgaactcatcaagtt
tatattggcagttttgaaccttcattgcctgaaaacagtacgtttgccgttgaaatttta
atttgcagacgttcatttttatactgttgtcgcatttcagttgagaaagaggtcgacgaa
ttgcttgaatggttgaattctgatacagctatgagtattcatcctgtagaattagctgct
ttgcttcattataaatttgttgttatacatccatttgttgacggcaacggacgcaccagt
cggctgctgatgaatttgattttgatgcaagcaggctttccgccggtgattattcgcgtt
gaagataggcttcagtattacgaaagtttgaaattggctaatgaaggtgatttgagaccg
ttcgtacgtttcattgccgaatgtactcgtagaactctggacgaatatttggcaaattca
atgtgttcagtagatgaagcttcgaatccattggaaccgattgtagacaatggacgaaca
attatcattgtcattgaacgatttgaaggagaaaagtatttacctgtactagacagatgc
aagtttctagtaccagatcatgtaacaatgacagagctgatgcagatagttcggaggcgc
ttggaattgcaccctgagcaggcgttgtttctcctagtcaacgaaaaaagccttgtttct
cattcaactacgttggctgaactgtacgaagctgaaaaagatactgacggctttttgtac
attgtttatacatctcagcctggttttgggtaa
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