Trichinella spiralis: Tsp_04139
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Entry
Tsp_04139 CDS
T01609
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_04139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_04139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_04139
Membrane trafficking [BR:
tsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
Tsp_04139
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Tsp_04139
Exosomal proteins of colorectal cancer cells
Tsp_04139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Motif
Other DBs
NCBI-GeneID:
10904724
NCBI-ProteinID:
XP_003374954
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MRRAGIISIERQLEAKRDQNSQSISQAFEDLTPLITMAKDMVSLAKEITGEISKKKGAIT
EDEAVQLKAHLLSLGIEEPVTREKVESSSSYFSKLSEECIAILSDPISESGGMLTLFDAY
VRVNRARGFDLISPSDFFRACKLINSSTSPIRMVTFRSQLRVLVNKDHDPSKMKTVLVNL
MEENGSLTAEQLSQKRQIPMLLAKELLLDAEDDGLLCRDETIEGIRFFPNLFLTNIP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgggcaggaataatcagcatcgaacgtcagctagaggcgaaacgcgatcaaaat
tcgcaaagtatcagtcaagctttcgaagatttgacaccactgataacaatggcgaaagat
atggtatcactggcaaaagaaattactggtgaaatttcgaagaagaaaggtgcaattact
gaggatgaagcagttcaactgaaagctcatctgttgagtttgggaattgaggaaccggtc
acacgagaaaaggtcgaatcttcttcttcttatttttctaaactctctgaagaatgcata
gcaattttgtcggatcccatatctgaatcgggtggaatgttaactttattcgacgcttac
gtacgggtgaaccgtgctcgaggtttcgacttgatttcaccttcagattttttccgcgcc
tgcaagctgataaacagttcaacatcaccaataagaatggtcacattccggagtcagtta
cgagtattagtgaacaaagatcacgatccttcgaaaatgaaaacggtacttgtaaatctg
atggaagaaaatggtagtttaactgccgaacaactatcgcagaagcgccaaatacctatg
ctattagccaaagagctactgctggacgcagaagacgacggcctgctttgcagagatgaa
actatcgaaggaatacgtttttttccaaatttatttcttacaaacattccatga
DBGET
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