Trichinella spiralis: Tsp_04151
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Entry
Tsp_04151 CDS
T01609
Name
(RefSeq) putative F-box domain protein
KO
K10307
F-box protein 30
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_04151
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
Tsp_04151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
10904736
NCBI-ProteinID:
XP_003374966
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MTLCPNGCEASMHRCKVEEHKQEICPKSQVDCINVGYGCPVKLKRRQRAAHLTHCPAAVI
YCAIERHRKLLPPDERRQIANTNNHHQRQQQHHEPCSEIDLCLALSDQRRIFTSAKSMLN
ALEEEERAEATLSPVARECILCKQDPSSQHLHVVGSMDQDHWISSNGMEEKKPNNWPKPP
APFYIKHGLQVGFSADFPPKHSSTPKHQASLVCGQRVRRDQYAQHVRNLHVDIVSSIDGW
LLARCPMYMQGCEWVRNRLIPTNNTTLHYLTWTDAIGVKMDHTQSCMPSTDTAALKLTDL
PVEILEQVFSKLDSISLRATAATCRRLRQVSLKQLNKHGLVELIWHRNKSGWKATELRWS
FSNTFQKIDQWHLLPTSQIGDHLRHCPYLNPVKHAQPMPVLRFVM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtgtcccaacggttgtgaagcgtccatgcaccggtgcaaagttgaagaacac
aagcaagaaatatgcccgaaaagtcaagtggactgtatcaacgtcggctacggatgtccg
gtgaaattgaaacgacgccaacgtgcagcccacttgacccattgtccggcggcggtcatt
tattgtgctattgaacgtcatcgtaaacttctccctccggatgagcgaagacaaatcgcc
aacactaacaaccatcaccaacgacaacagcagcaccatgaaccatgcagtgaaatcgac
ctgtgtttggcgttgagtgaccagaggcgcattttcacttcggcaaagtcgatgttgaac
gctttggaagaagaagaacgagccgaagcgaccctgtcaccagtggccagagaatgcatc
ctctgcaagcaggatccgagcagtcaacatttgcacgtcgtcggttcgatggaccaagac
cactggatatcgtcgaatggaatggaagaaaagaaacccaacaattggcccaaaccgccg
gctccgttttacatcaaacacggcctgcaggttggcttttcggccgacttcccgcccaaa
cattcttccactccgaaacaccaggcgtcgttggtctgcggccaacgggtccgtcgcgac
caatacgcccaacatgtccgcaatttacacgtcgacattgtcagctcgatcgacggttgg
ctgcttgcccggtgcccaatgtacatgcaaggctgcgaatgggtacgaaatcgtctgatt
cccacgaacaacacgaccctccattatttgacttggaccgacgccattggggtgaaaatg
gaccacacccagtcgtgcatgccgtcgaccgatactgcagcgttgaagctgacggatctt
ccggtggaaattttggaacaagtattttcgaagctcgattcgatcagtctacgcgccact
gccgccacatgccgtcgtctcagacaagtcagcttaaagcagttgaacaagcacggctta
gtggaattgatctggcatcgcaacaagtcgggctggaaagccaccgaattgcgttggtca
ttttcgaatacttttcaaaaaatcgaccaatggcatctactgcccacaagtcaaatcggt
gaccacttgcgtcactgcccctacctgaaccccgtcaagcatgcgcagccaatgcccgta
cttcggttcgtgatgtga
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