Trichinella spiralis: Tsp_04166 Help Entry Tsp_04166         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K17890   autophagy-related protein 16-1 Organism tsp  Trichinella spiralis Pathway tsp04136   Autophagy - other tsp04140   Autophagy - animal tsp04145   Phagocytosis Brite KEGG Orthology (KO) [BR:tsp00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     Tsp_04166    04140 Autophagy - animal     Tsp_04166    04136 Autophagy - other     Tsp_04166  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tsp04131]     Tsp_04166    03029 Mitochondrial biogenesis [BR:tsp03029]     Tsp_04166 Membrane trafficking [BR:tsp04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     Tsp_04166  Others   Specific organelles associated proteins    Auto phagosome     Tsp_04166 Mitochondrial biogenesis [BR:tsp03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     Tsp_04166 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML EIF3I WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_TEP1_C DSE1_N Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 ASA1 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_SCAP PAC11 WD40_like ATPase_2 Beta-prop_NOL10_N NACHT ABC_tran AAA_22 Motif Other DBs NCBI-GeneID:  10904752 NCBI-ProteinID:  XP_003374982 LinkDB All DBs Position Unknown AA seq 576 aa AA seqDB search MRSLKLQYELAEAAEPFVQIDDMENIWCSYYDIVFESHQMIEVHLEKIHRRRQYLILVEA HDGEVLTLCWGRCGKILATGGTDRRLKLWEIVDGQHGRPATLMGCNQAVTCADFDLNGSL VLAGSNDFATRIWSVADQRLRHSLTGHSGKVLCAKFVTGGRVITGSHDRTIRIWDLQGYR TLLSASTCYDLVAVGNSQSMLISGHFDKKIRFWDDRCQHVVKDMQVGGKITSLDVANDDV NLLCTTREDLIYCIDLRQCLVKRSFGADGFKIGYDFVRGKFSPDSHYCICGSADGNVYIW NAMSGKLETVLTNGHSSCVIASMWNLDGTVVATCEKQKFSMTFKYRTETGSQLFSRLNPK PALSISLGGLFPDPLQPKHIVEIVGGSGSGKTLLLLEVGVLLLDCDRHFCLSALVNVLSM RNPGAKDEQALLNCLNRLHSIVCRNGEDLWHSLDFADKIVHRTASLMNVIIIDSVSAFSL TSAGNLREKHERLVLKVRRTVEEHNLVAFITRQTVTRHPDRAEETGRHVSAILDHCWRKA NTVRVQTHCFNWNQFQATVDNRIVHFRSINGRPCFN NT seq 1731 nt NT seq  +upstreamnt  +downstreamnt atgaggagtttgaaacttcagtatgaattagccgaagcagctgagccgtttgttcaaatt gatgacatggaaaacatatggtgtagttattatgatattgtttttgaatcacaccaaatg atcgaagtgcatttagaaaagattcaccgtcgccgtcaatatctgattctagtggaagct cacgatggagaagtgttgacattgtgctggggtcgttgtgggaaaattttagccactggc ggaacggatcgacggcttaaactgtgggaaattgttgacggtcagcatggtaggccggct acattgatgggatgcaatcaggctgtgacttgtgcggattttgatctcaacggaagtcta gtgttggcgggaagcaatgatttcgccactcgcatctggagtgttgctgaccagcgactt cgacactcgcttactggccacagcggcaaagttttgtgtgcgaaatttgtaactggcggt cgagtgatcactggttcgcatgaccgtacgattcgaatttgggatcttcaaggctataga acgttgctttccgcttcgacttgttacgatctggtggcggttggcaattcgcagtcaatg ctgattagtggtcattttgacaaaaaaatacgtttttgggatgatcgttgtcaacacgtg gtaaaagatatgcaagttggaggaaaaattacatctctcgacgtagccaacgatgacgtc aatttactatgcactaccagagaagatttgatttattgcattgatttgaggcagtgtttg gtgaaacgtagttttggggccgatggtttcaaaattggttatgattttgtcagaggaaaa ttcagtcctgattcacactattgcatctgcggctcagcagatggaaatgtttacatatgg aatgcaatgtcaggcaaattggaaacagttctaaccaacggacatagttcttgtgtaatt gcatccatgtggaacttggatggaacagttgtggccacttgtgaaaaacaaaaattttca atgacttttaaatatcgtaccgagactggtagtcagctgttttcacgtttaaatccgaaa ccagctttatcgatatctctgggaggtctgtttcctgacccattgcagccgaagcatatt gtggaaattgtcggcggcagcggctctgggaaaacgttgcttctgctggaagtaggtgtg ctgctgttggactgtgatcgtcatttttgtttatccgctctggtgaacgtgttgtccatg cgtaatccgggtgccaaagatgaacaagctttgctgaactgtttgaatcgacttcactcg atcgtttgccgcaacggcgaggatttgtggcacagtttggattttgccgacaaaattgtc caccgtaccgcttcactgatgaacgtgataattattgacagtgtttcggctttttctctg accagtgccggtaatttgcgcgaaaagcacgaacgtctggtcttgaaagtgcgacgcaca gtcgaagagcacaatttggtcgctttcatcaccaggcaaacggtcaccagacatccagac cgtgcagaagaaactggacgtcatgtttctgcaattttggaccattgttggcgcaaagcc aacaccgtacgcgtgcaaacccattgcttcaactggaatcagtttcaagccaccgtggac aatcgaattgttcattttcgatcgattaatggaagaccctgtttcaattga

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