Trichinella spiralis: Tsp_04224
Help
Entry
Tsp_04224 CDS
T01609
Name
(RefSeq) Vps52 / Sac2 family protein
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_04224
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Others
EARP complex
Tsp_04224
Endosome - Golgi transport
Tethering complex
GARP complex
Tsp_04224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_CC
Vps52_C
Sec3_CC
Sec3_C-term
Motif
Other DBs
NCBI-GeneID:
10904972
NCBI-ProteinID:
XP_003375038
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MRCNDDDDDYGIVAGCGRTVSTNVVVDHPNEDVVEMLNANSMEQWKKDPSAGDVAEIEVT
VQNVNPLAASSEQQDVSNRPTTTTIGTPLDYVTAMELLTNDFRFRLYTVFHQRIIFAWLI
ASLIVMFCVLFSNARGLVLFALSLGWSSVIGLGTLLCVIFERMLEVAKNVEKLGLKLHRR
QHHLPIPTTPSVSSQVDIVAAPTTAQNKHTQRYCRDLIRQGINLPVVRFQDQTDDMSITV
KHCKFALCLCQYLEKCHFQKRRRSLFCWSLCVLFVNFQKVMSTEKDNPDAGIISDKTTAV
DGELLSEILGMQMESMLTAFQSDLGNISNEIQSLQEQSVKMSVKLKNRQAVRGELSQFID
EIVVPEVMIKTIIDEPVSERLFLEQLHELQHKIAFVKQQAFREALSCVEVEGLLENLRLK
ATEKTRDFLLKRIYQFRKPMANYPVTQGTLLKYRFYFEFILSNDRYVAKEIRDEYVNTTS
KIFYTYFKTYASRLMKLQLDDVATKDDLLGSDDSTKMVNMFSTRPNVRNRATVFSLGSRM
SVLKEDLEAPIIVPHAADQNKQKIIRRYGEFFAALAAVNADLPDEKLQQYLYRLENEVAH
LLARAMHEFKSIRERTIFLINNYDLIVSVLMEKLPGESIDSQESSKRLQAYITEYAELLL
TTHFGSLVNFVYQAESLIEQGMQEKLKDNSENIFSTNTVLSPVAQSVGHANVESPGQK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcaacgacgacgacgacgactacggcattgttgctggatgtgggcgaacagtg
tcgactaatgtcgtcgttgatcatccgaacgaagatgttgtggaaatgttgaatgcaaat
tcaatggaacagtggaaaaaggatcccagtgcaggtgacgtggctgaaatcgaagtcacc
gttcaaaatgtcaatccactggccgcatcttcggaacagcaggatgtttcgaatcgacca
acgacgacgaccattggaacaccattggattatgtgaccgctatggaattgttgacgaac
gattttcgttttcgtctgtacacagtatttcatcagagaatcattttcgcctggttaatt
gccagcttgatagtgatgttttgtgttcttttttccaacgctcgaggtctggtgttgttc
gcattgtctctcggctggtcgtctgtaattggacttggcacgttgctttgtgtaattttt
gaacgaatgttggaagttgcgaaaaatgttgaaaagctcggcttgaaattgcaccgtcga
caacatcatttacccattccaacaacgccaagcgtctcgtcgcaggtcgacattgtcgcc
gcaccgaccactgctcagaacaaacacacgcagcggtattgtcgtgatttgatcaggcag
gggatcaatttgccggtcgtcaggtttcaagaccaaaccgacgacatgtccattacggtg
aagcattgtaaatttgcattgtgtctgtgtcagtatttggaaaagtgtcattttcaaaag
cgtcgtcgttcgttgttctgttggtctctgtgtgttttgtttgttaattttcaaaaagtc
atgtccactgaaaaagacaatcctgatgctggtataattagtgacaagacaactgccgtc
gacggagagctgttatccgaaatattgggaatgcagatggagtcgatgttgacagctttt
cagtcggatctgggcaacatcagcaacgagattcagtcgttgcaagagcagtcggtgaag
atgagcgtcaagttgaaaaatcgacaagccgtccgaggtgaactgagtcagtttatcgac
gaaatcgtagtcccagaagtgatgatcaagacaattatcgacgaaccggtgtcggagagg
ctttttcttgaacaattgcacgaattgcaacacaaaattgcattcgtcaagcagcaagcc
tttcgtgaagctctttcctgcgtcgaagtggaaggtctattggaaaatctacgactgaaa
gcaacggaaaagaccagagattttttgctcaagcgaatataccaatttcgcaagccgatg
gcgaattatccagtcacgcagggcacgttgttgaaatacagattctatttcgaatttata
ctttccaacgaccgttacgtggccaaagagattcgtgatgagtacgtgaatacgactagt
aaaattttctacacctacttcaaaacgtacgcgagtcgactgatgaaactccaactcgac
gacgttgctactaaagatgatctgctgggatcggatgattctacgaaaatggtcaacatg
ttctccaccagaccgaacgttcgcaacagggcgacggtattttcgctcggctctcgcatg
tcggtattgaaagaggatctggaagctccgattatcgtaccccacgcggctgatcagaat
aagcaaaaaatcatacgacgatatggtgaattttttgcagcgttggcagctgtgaatgcg
gatttaccggatgaaaaattgcaacaatatctttaccgtttggaaaatgaagtggctcat
ttgttggctcgtgctatgcatgaattcaaaagcatccgcgaaaggaccatctttttaata
aacaattatgatttgatcgtttcagtgttgatggaaaaattacccggcgaatcgattgat
tcccaagagagtagcaaacgtttgcaggcttacattactgagtacgcggaactgttgctc
accacccactttggcagtttggtgaatttcgtctatcaagccgagagcctcattgaacaa
ggcatgcaagagaaattgaaagataattcagaaaacattttctcaactaatacagtacta
tcaccggttgcacaaagtgttggccatgccaacgttgaatcacccggccagaaatga
DBGET
integrated database retrieval system
