Trichinella spiralis: Tsp_04244
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Entry
Tsp_04244 CDS
T01609
Name
(RefSeq) putative C2 domain protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
C2
Motif
Other DBs
NCBI-GeneID:
10904992
NCBI-ProteinID:
XP_003375058
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MNVGWGGRGRVLFYNLALAVKRGVVVDVGLERSEQGAQFEISRFQRRQQQRGRLPAAPDR
QQQHQHQHQLLQYCSGSVQRRLFSFVRPLVAVSNAELFSRHDGQFSRRCHAQIFLLRNSR
RTGSLALQYYCDAQYDSVTLNHAMQPNRDQMRRKEKSLQVWILEAKGVTAKRRYFCELAL
DSQLYSRTSSKLNQDICFWGEQFVVNNLIKLDEVKICLYRESERKKRKDRNTLVGSVRIP
VRELCSKYAVEKWYVLNGQEKSASKGETISLRVKARFQSISILPLKAYSRLLQFLTDKYL
ETCLALEPVLGVKAKEDFATSLIRIMHSQNLAKHFLCDLIMSEIKTLENDHLMFRGNSLA
TKAMEAYIKMIGEQYIQRTLASFVQSVQDSGEDCEVDPEKLPASADIVKHQEALLTTVHA
AWGRILNSFYEFPIELRLVFHELRNRLADCGRGELADNLISSKYPYGKTARNLTLVAKTV
QTLANFTKFGAKEHYMEFMNRFVEGEWQHMRQFLRRISSPLCTNFPCKTTEWSGVIDLGK
ELSLLHSYLIEVLPEAVAKKSNWENLNRLCKIVDDVSCAYNMSDISCCSSASPESAGSSD
YENKGESPCVALSFDSSGDERSKALTDDDLWYNAVDENIGLRRMGLMVQQSRLKQQLSLS
KANGFELGRSISTQSTGNNTALPTTITTTTAATTTTADGNISAGQQQKQQQLVAGGGDFS
FGGCATAAAAAACSDDICYVDETTSLLFKSSSNAQNPITVEPSTIGTSDYNSLSNSPVGS
ADSSSGCSEKRLPAADQTSSSATMSNDISLAVANPLYSLQHVPVVWSSSAKTNKPDNSAS
AAAATASPTTIVTTTSATATTITAAVPASSASDVDRLLRRAPPLRSIDSVDTFHTATNSS
TSSSSSSSSSSTSSSTNHHASSQMETVSSNNSNNNNKYPRPRTNPHFAGGHHHSRAMSLS
IAAVNAVPPISCPIASGSSVSGEQLNQRSGGCQQTAELLLAREVQELRIRLDESQSRLQQ
AELRERTWKQKYEESVPIKWSSDPVQPILHRLRLVEEELQQEMNSSAQKQQLIDEQRDRI
QALLATNERLALNLSKLQEKSASAEQMLLLTSLHKRPLDKSVSVNGHEEKKPTSTCGKFA
PQRANQQHRRSWDPCASSSICFSSCSSSSSSSSSSSSSSSSPAATTADTNNVCCQATAVV
NTVITAAAEFAQLKTTQC
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggggtggggtgggcgggggcgtgtactattttataacctggcgctggctgta
aaacggggcgttgtcgtcgacgtcggcttggaacgatctgaacaaggtgcgcaattcgag
atctcacgattccagcggcggcagcagcagcgcggccgcttgcctgctgccccagaccgg
cagcagcaacaccaacaccaacaccaactgctgcaatactgtagtggatctgtccaacgc
cggctgttcagcttcgtccgtccactcgtcgctgttagcaacgccgaactgttttcgcgt
cacgacggtcaattcagccggcgttgccacgcccaaatatttctcctgcggaacagccgc
cgaacgggatcgttggctttacagtactattgtgacgcacagtatgacagtgtcaccctt
aatcacgcaatgcagcccaatcgggatcagatgagaagaaaagagaaatcgttgcaagtg
tggattcttgaagcaaaaggcgtaacggcgaaacgacgttatttttgtgaactcgctttg
gatagccaactctattcgaggacgtcgtctaaacttaatcaggacatttgcttttggggt
gaacagtttgttgtaaataatttgataaaattggacgaggtgaaaatttgcctctaccgc
gaatctgagagaaagaagcgcaaagatcgcaatacgttggttggctcagttcgcatacct
gtacgagaactttgctcgaaatatgcagtggaaaaatggtacgttttaaatggccaagag
aaatcagccagcaaaggcgaaaccatttcactgcgggtgaaagctcgatttcagagtatt
agcatcttaccgttgaaagcttacagcagactgctacaatttttaactgacaaatatctt
gaaacgtgtttagctttggaacctgttttgggagtgaaagcaaaggaagattttgccaca
agtctgatacgaatcatgcattctcaaaatttagccaaacattttctttgtgatctcatc
atgagcgaaattaaaacactggagaacgaccatttgatgttccgtggcaattctttggcg
acaaaagcgatggaagcgtacattaaaatgatcggtgagcagtatatccaacggacgttg
gcgtcatttgttcaaagtgttcaagattcgggtgaagattgtgaggtggatccggagaaa
ttgccagcttcggctgatattgtcaaacatcaggaagcactgttaacaacagttcatgct
gcttggggaagaattttgaactctttttacgagtttccaatagagcttcggctagttttt
cacgagttgcgtaatcgtctggctgattgtggacgtggagaattggccgacaatttgatc
tcatctaaatatccgtacgggaaaacagctcgaaatttaactctagtcgccaaaacggtg
caaacgttggctaattttacgaaatttggcgccaaagaacattacatggaattcatgaat
cggttcgtcgaaggagaatggcaacacatgcgacaatttttgcgtcgcatatctagcccg
ttgtgtacgaattttccttgcaaaactaccgagtggagtggcgtgattgatttaggcaaa
gagttgtcattgttgcacagttatttgattgaagtacttccggaagcagttgctaaaaaa
agtaattgggaaaatttgaatcgtctttgtaaaattgttgacgacgtcagttgcgcttac
aacatgtcagacatatcgtgctgtagttcagcttctccagaatcggctggctcttcagat
tatgagaataagggtgaatcaccttgtgtagcgttgtcttttgacagcagtggagatgaa
cgttccaaagcattgacagatgatgacttgtggtataatgcagttgatgagaacattggt
cttcgtcgtatgggattgatggtacagcagagccgtttgaaacagcagttgtcgttatcg
aaagcgaacggtttcgaattgggcagatccatttctacccagtccactggtaacaacact
gcattgccaacaacgatcaccaccacaactgcagcaacaaccacaacagcggacgggaac
atcagcgcaggtcagcagcaaaagcagcagcagcttgtggccggcggaggtgatttcagt
tttggtggttgtgccactgctgctgctgctgctgcttgttcggatgatatatgctatgtc
gacgaaaccacgtcattgttgttcaaatcttcctccaatgcacaaaatccgattactgta
gaaccgtcgacgattggcacgtcggattacaactcgttgagcaacagtccagtgggcagc
gcagacagcagcagcggatgttcagagaaacgtttgccagctgctgatcagacatcttcg
tcggcaacaatgtccaacgacatttccctcgctgtggccaatccactctattccctgcag
catgtacccgttgtatggtcttcatctgctaaaacgaacaaacctgataattctgcttct
gctgctgctgccaccgcctctcctactactattgtcaccactacttctgctactgctact
acgattacagctgctgtgcctgccagtagtgcctctgacgtggatcgtttgctccggcga
gcaccaccgttacgttccatcgattcggtcgatacatttcatacggcaacaaattcttct
acttcatcttcttcgtcgtcgtcctcgtcgtcgacgtcctcttccacaaatcatcatgca
agttctcaaatggaaacggtctcttctaacaacagcaacaacaacaacaaatatcctcgc
ccaagaacaaatcctcacttcgccggtggtcaccaccatagtcgagcgatgtcgttgtca
atagctgcagtgaacgcggtgccgccgatttcgtgcccaatcgccagcggttcctctgtt
tcgggtgagcagctcaaccaaagaagcggtggttgtcagcagacggcagagttgctgctg
gcccgagaagtgcaagagttgagaatacgtttggacgaatctcagagtcgacttcaacag
gctgaactgcgtgaacgaacttggaaacaaaaatatgaagaatcggtgccgatcaaatgg
tcctcagatccggtgcagccgatattgcatcggttgagacttgtggaagaggaactgcag
caggagatgaattccagtgcccagaagcagcagttgatcgacgaacagcgcgaccgtatc
caagcgctgttggccaccaacgaacggctggcgctgaatttgagtaagctgcaagagaag
tcggcttcggctgaacaaatgctgctactgacgtcgctgcacaagcgtccacttgacaaa
agcgtttcagtgaacggccatgaagagaaaaagccgacgtcgacatgcggaaaattcgcc
ccccaacgcgccaatcagcagcatcgtcgcagttgggatccgtgtgctagcagcagtatc
tgcttttcctcttgctcttcttcctcttcctcgtcctcctcttcgtcgtcgtcttcgtcg
tcccccgctgcgaccaccgccgatacgaataacgtctgctgtcaagctactgctgtcgtc
aatacggtcatcactgcggccgctgaatttgctcaactcaaaactacccaatgttaa
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