Trichinella spiralis: Tsp_04363
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Entry
Tsp_04363 CDS
T01609
Name
(RefSeq) putative Low-density lipoprotein receptor domain class A
KO
K20053
very low-density lipoprotein receptor
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_04363
Membrane trafficking [BR:
tsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
Tsp_04363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
DUF5050
Motif
Other DBs
NCBI-GeneID:
10905436
NCBI-ProteinID:
XP_003375177
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MGTKAIFGQNEILLCKFDHGTVNQNAEASSLAKTAQLCSFQIMKCKNNLCKLLLLYVFFL
ANNSSKATETEKLKSEDLFECWKSETYIPVEKVCDGKVDCQDNEDESICPNIKNVTTEED
VEKHQRSIKAKNEKKCGIHKFRCKNGKCISKKKLCDGEFDCIDGSDEQNCSVKMGLMKSD
CPSNTFHCNSEPSICLPVDLICDFERDCPNGEDEMHCEHECLENQFKCKNNRCIDKEFIC
NGMDDCGDGTDEESCMDHLLFEEYSNRLECKNFEYKCYMGPCIPTSVVCDGFRDCPNGDD
EHKCPTFHICHENEFQCKDKLFCFPESWVCDGIADCRDKSDEIDCPNNDFLYDLCSSDSF
ICSDGSCIPREKMCDGSADCNDKSDEHIYCGACKTENGGCPNKCREGAFGVECQCGNTWR
QASLFSSEDHCPKVDYCELHTDECDHFCHSNATNFSCSCSEGYDLEYNLRTCKLKHKHLG
HLVFSIGHQIRSISINSKEYIGADYTILFDEECSKEKDNGRIMALDYNYKKKQILFSRKT
SVYSLANNEEKCLFGEFLSFVNVAVDWVTSNIYFADEMLSRIGVCNEDGRYCTVFDKLSL
RRPRGLATHPKYGYLFLCDWGANASIIRVAMDGQSWQVLHHKKLSWPNSVAVDYVRDMVY
WMDAKYKLIERSRLDGSEREVVASKGVHHPFDMVVFDGRVFWSDWTAKSLLWVSIFNGSE
EGSVQSVEFDPYGIAINHPVYQNQSSNSL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaggccattttcggtcaaaatgagattctactatgcaaattcgatcacggt
actgttaatcaaaatgcagaagcgtcatctttagcaaaaacagctcaactttgctctttt
caaatcatgaagtgcaagaataatttgtgcaagctgttgcttctttatgttttcttttta
gcaaacaatagtagcaaagctactgaaactgaaaaacttaaaagcgaagatttgtttgaa
tgctggaaatctgaaacttacattcctgtggagaaagtttgtgacggcaaagttgactgt
caggataacgaagatgaaagcatatgcccaaatataaaaaatgtaaccactgaagaagac
gttgaaaagcatcagcgttctataaaagcaaagaatgagaaaaaatgcggtattcacaaa
ttcagatgcaaaaatggaaagtgcataagcaagaagaagctctgtgatggtgaattcgat
tgcatcgacggctcagatgaacaaaactgctcagtcaaaatgggattaatgaagtcagat
tgtccaagcaatactttccattgcaattctgaaccctctatatgccttccagtcgatcta
atctgtgattttgaaagagactgtccaaatggagaagatgaaatgcattgtgaacacgag
tgcttggaaaatcaatttaaatgcaagaataacagatgcattgataaagaatttatatgc
aatggaatggacgactgcggtgatggtactgatgaagaatcatgcatggatcatcttttg
tttgaagaatattcaaaccgcctagaatgtaaaaattttgaatataagtgctatatggga
ccatgcattcctaccagtgttgtatgtgatggcttcagggattgtccgaatggtgatgac
gaacacaaatgtcccactttccatatatgccatgagaatgaatttcaatgcaaagataaa
ttattttgcttccctgaaagttgggtatgcgatggaattgctgactgcagagacaaatct
gatgagattgactgcccaaataacgatttcctctacgacctatgctcttcagacagtttc
atttgcagtgatggttcttgcattcctcgtgaaaaaatgtgcgacggcagtgcagattgc
aatgacaaatccgatgagcacatctattgtggagcatgcaaaactgaaaatggcgggtgt
cctaataaatgcagagagggcgcttttggagtggagtgtcagtgtggtaatacgtggcga
caggcttcgctattcagcagtgaagatcattgtccaaaggttgactactgtgaattgcat
acggacgaatgtgatcatttttgtcattcaaatgcaacaaacttcagctgtagctgctca
gaaggatatgacctggaatataaccttcgcacttgtaaactcaaacataaacaccttggt
catttagtattttctattggtcatcagattcgaagcatttctataaatagcaaggaatat
attggtgcagactataccatcttgtttgatgaagaatgtagcaaggaaaaagataatggc
cgtataatggctttggattacaattacaagaaaaaacaaattttatttagccgtaaaact
tcagtgtacagtttagccaataatgaagaaaaatgcttatttggagaatttctcagcttt
gtcaacgttgctgttgattgggtaactagtaacatttattttgcagatgaaatgttatcg
cggataggagtgtgtaatgaagacggtcgatattgtacagtgtttgataagctgagttta
cgtcgacccagaggtttggcaacacatccaaaatatggctatttgtttctatgcgattgg
ggcgcaaatgctagcattattcgggttgcaatggatggccagtcttggcaagtgcttcat
cataaaaaattaagttggccaaattccgttgcagtagattatgtacgtgatatggtttac
tggatggacgctaaatataaattaatagaacgcagccgattagacggaagtgaacgagaa
gtggtagctagtaaaggtgttcaccatccattcgatatggtcgtgtttgatggccgtgtc
ttttggtccgactggactgcaaaatcattgctttgggtgagcatattcaatggcagtgaa
gagggctcagtgcaaagtgttgaattcgatccgtacggaatagcaatcaatcatccagtt
tatcaaaaccaaagttcaaactcactctag
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integrated database retrieval system
