KEGG   Trichinella spiralis: Tsp_04390
Entry
Tsp_04390         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K20474  RAD50-interacting protein 1
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_04390
Membrane trafficking [BR:tsp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   NRZ (DSL1) complex
    Tsp_04390
SSDB
Motif
Pfam: RINT1_TIP1 MACPF_D3
Other DBs
NCBI-GeneID: 10905463
NCBI-ProteinID: XP_003375203
LinkDB
Position
Unknown
AA seq 676 aa
MDGEYSCLLDSIIEAFLKVANLRNEVQLKFDKNAALCATNMIAELERCEAKLNKYDSTAP
DLQKLYELRNHRTRCAYNKVLNEVQLLTSELNSMVQNKMWVLALNKYDKLRLLKERMENS
SCKHLKSYLEKVTAQWKSYFENLCLKWIYDSTEKLGLVYYDKEKSANTVFQKQHFIDIGN
LAMTVAMKIADLEELPKIFASPFTRRFVYFFCSSKTADMTMDKVKPEHYLSVAFYWISEG
RKWIEEICKCQMHDKAYEFSFKFARIILDQVVERVLFDLKQAVLDDDVERFSHIIDEMSA
FDVELRRNKRIFYADFSKYNPSDYLEDFPCTEPGCMEVLVNDDLFDYWYTLENDEMTKYI
NGVSKNAKSWKPRFENQSAEDKDKVPYCVDRFLILIVAFVRRFKLVISFNHRLRLAKLLC
SFLVEFYDCLLSLSQTFNIDNHKSPVAELLNGIAYLVQVLKQWQEQPIFVQLHPGLFDSV
VAQFCTIQENCLDGIVKAEVTRLSKLVRGKFRPALERGDALLHSVFAETVVWPVHKILLE
RANLLNEEVFCSWLMKFANRLADELLNKFLLTIHCDRNLGLKLQKLFLDLFCLFLGRCED
STYHTFRLASSCFDRLAQSLIILAANVPVCLMLQESLLNKDEDVDSLLNSLSAGDLTPDL
LRKLLSVRTDLIRTYS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggatggtgaatactcttgcctgctcgattcaatcatcgaagcatttcttaaagtagca
aatttacggaatgaagttcaactgaaatttgataagaatgcagctctttgtgcaactaat
atgattgcagaattggaaaggtgcgaagcaaagttgaataaatatgactcaactgcaccc
gacctgcagaaattgtacgaattgagaaatcatcgaactagatgtgcatacaacaaagtt
ttaaacgaagttcagttgctgacttcagaattgaatagtatggtacaaaataaaatgtgg
gttctagcattgaacaagtacgataaattacgattattgaaagagcgtatggaaaattca
tcttgcaagcatttgaaaagctatcttgaaaaagtaactgctcagtggaaatcctacttt
gaaaacttgtgcttgaagtggatatatgattcgacagaaaaattgggtctagtttattat
gataaagaaaaatctgcgaatacagtttttcagaaacagcattttattgatattggaaat
ttggcgatgacagttgcgatgaaaatagccgatttggaagagttgccgaaaatatttgct
tctccatttacgagaaggtttgtttattttttttgctcttcaaaaacagcggatatgacg
atggacaaagtaaagcctgaacattatttatcggtggcattttattggatatcggaaggc
agaaaatggattgaagaaatttgtaaatgtcaaatgcacgacaaggcgtatgaattttca
tttaaattcgctcgaatcattctcgatcaagttgttgagcgagttctttttgatctgaag
caagcagtgttggacgacgatgtggaacgtttttctcacattatagacgagatgagtgct
ttcgatgtagaattgcgacgtaataagcgtattttttatgcagatttttcaaaatataat
ccaagtgattatttagaagattttccttgcactgagccaggttgtatggaagttcttgta
aatgacgatttgttcgattattggtacacgttggaaaatgatgaaatgaccaaatacatc
aacggggtttcgaaaaatgccaaatcatggaaacctcgttttgagaatcagtcggctgaa
gacaaggataaggtcccttattgtgtggatcgatttttgattttgatcgtagcgtttgtt
cgacgcttcaaattggtcatttctttcaaccaccggctacgtttggccaagttgctttgt
tcatttttggttgaattttatgattgtttgctttcactttcacaaacgttcaacatcgac
aatcacaaaagtccagtggctgagctgctcaatggaattgcttatttggtgcaggtgctg
aagcagtggcaagagcaaccgatttttgtacaattgcatccaggtttgttcgacagtgtt
gtggcacaattctgcactattcaggaaaactgtttggatggtattgttaaagccgaagtg
acacgtttgagtaagcttgtcagaggcaagttcaggccagcgttggaacgtggtgatgct
ttgttgcattcggtttttgccgaaactgttgtatggccagtgcataagattttgctggaa
agagccaatttgttgaatgaagaagttttttgttcgtggttgatgaaattcgccaatcga
ctagccgatgaattgcttaacaaatttttactaacaatccactgcgatcgaaatttgggc
ttgaaattgcagaaactttttctggatcttttctgcttgtttctcggccggtgtgaagat
tccacataccatacttttcgattggcatcttcttgctttgaccgcctggcccagtctttg
attatattggccgctaacgtgccggtctgtttgatgttgcaagaaagtctgctgaacaaa
gatgaggatgttgattcgttgttaaattcattatccgctggtgatttgacaccagattta
ttgcgaaagttgttgtccgttaggacagatttaattcgaacctacagctag

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