Trichinella spiralis: Tsp_04546
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Entry
Tsp_04546 CDS
T01609
Name
(RefSeq) ubiquitin carboxyl- hydrolase family protein
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Tsp_04546
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_04546
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_04546
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_04546
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
Tsp_04546
Peptidases and inhibitors [BR:
tsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
Tsp_04546
Membrane trafficking [BR:
tsp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
Tsp_04546
Ubiquitin system [BR:
tsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
Tsp_04546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Git3
DUF5775
Motif
Other DBs
NCBI-GeneID:
10912395
NCBI-ProteinID:
XP_003369120
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MSCSFLLTAHLNMKLGMRVIKTMDRQCLMIVGTVTAASIIALALFFFMDSKERKRLRKVP
GLYNYGSVCFVNSLLQSLASCSSFVSWSAQFSNNEEYCFLKALGIILQELNDHSKYALSS
QIIINSLKQRGWNLETNIQQDVHELLNVFDSAWDEELSPLFKTVDINSDAGEAIQVPSHG
KIRSETVCHACSHKTSNLEDFGAVTLNFPTNINMPSISLEECLLCYMKPECLLDAICENC
SSVTGNVKMYKTLKFEIVKEKNIDKSTLMWLPSGMSFKIATVVNLPELLDLQHLAEIVRH
PKADQSTLPSNPSLRSCNDKLYRLEAVIVHRGNHQYGHFITYRRDIDNQSLWCAVSDDEV
KPIQFDSVTSCQAYMAFYEKAKIESNSEH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgctcatttttactcacggcacatctgaacatgaaattgggcatgcgagttatc
aaaacgatggatcgtcaatgcttgatgatagtaggcaccgttactgctgcaagtatcatt
gctcttgcattgtttttcttcatggattccaaggaaagaaagcgattgcggaaagttcct
ggattatataattatggttcagtatgctttgtaaattcacttttgcaaagcctggcaagt
tgtagcagttttgtcagttggtcagctcagtttagcaataatgaggaatattgctttttg
aaagcattgggcattattttacaagagcttaatgatcattcaaaatatgcgctgtcatca
caaattattattaatagtttaaaacagcgtggatggaatttggaaacaaatatacaacaa
gatgtgcatgaacttttaaatgtttttgattcggcttgggatgaagagttgagccccttg
tttaaaactgtcgatataaattcggatgccggagaagctatacaggtgccctcacatgga
aaaattcgaagtgaaaccgtatgccacgcttgtagtcataagacttcgaatttggaagat
ttcggagctgtgacacttaattttcctacaaatattaacatgccgagcatctctttggaa
gaatgtttgctttgttatatgaaaccggaatgtctgcttgacgcaatatgtgaaaattgt
tcctcagttacaggaaatgttaaaatgtataaaacgctgaaatttgaaattgtaaaagag
aaaaatattgataaatcaacactgatgtggcttccttctggtatgtcatttaagattgct
acggtagtgaacttgccagaactgttagatctgcaacatttggcagaaattgtacgtcat
ccaaaagcagatcagtcgacattgcctagtaatccgtcgctgagatcatgcaacgacaaa
ctttaccgtctggaggctgtaattgtgcacagaggaaaccatcagtatggtcatttcatt
acttaccggcgtgatattgacaatcaatcactttggtgtgctgtttcggacgatgaggta
aagccgattcaattcgacagcgttacaagctgtcaagcttatatggcattctatgaaaaa
gcaaaaatagaatccaactcggaacattga
DBGET
integrated database retrieval system
