Trichinella spiralis: Tsp_04600
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Entry
Tsp_04600 CDS
T01609
Name
(RefSeq) putative HECT-domain protein
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_04600
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
Tsp_04600
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
HECT type E3
Tsp_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
10912451
NCBI-ProteinID:
XP_003369175
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MHIFMHEQYQLNEKRHSFLERVRSAREQREAEQRLKHAATLIQKRFLGIDPRFSDTEEEK
QRSELKCKRIVNDIDIPTTVLEVHVAVEYLLLVRYLLLSSEASDLENNIVIVALTPSSAF
SWLHLMRKILCKCIIFLANLRDLMNLDHVNDTKLNLYLHLLLSFTSTASWAALKSEEGVC
LHVFALGGKLRPSMDKLCERLLINLVHADFYPQLSVTDIGATLLLRPICRDEIDDNVLSQ
YIRCILTTPALIWHLKHEANSFKLNLLNGKLLLRCMQFLRERSANDEFFAKLEVGTEVCI
LGNIVNMAYLEHEILQSNRELFLVRSEIYQSDIVLLSWKHSREKAVYVVLATIFWMVQKT
DKWKIAGSIAVCNKANSTFVGSDAAILSKLRRGAPKLKPKQVPSKLKPTQAAKEAVFGLA
MYQNVLNTFSPLKYDVLSGLCYQDFLLPKIWETLVASDIESAVNHYLQMFVSDKSQSSAE
SLSFIVFFESATYLMTILDDYELFTLEKPFQVRQLISMAHFCNLFIFRSVWEKIVGRDLK
SSVFLNEVNRGNKKALFIIQRIPHVIPHRERIKLFRKYVASEKASLAAARLFEDQMSVII
TIHRARIVEDGFRQLSQLPGRILKGIVRVKFINEQGLDEPGIDQDGVFKEFLEEVIKNIF
DPALNLFKLTNEGHLYPSPTSYIHENYLLLFEFIGKMLGKAVYEGICVDILLASFFINHL
IGRTASKYHSSIDELSSLDADLYKQLTFIKHYEGDMNDLGLTFACDEDILGEVVTHELRP
GGRTIPVTKENKISYVHLMAHYRMFVQIKDQIAAFMRGFHAIISPEWLRMFSADEFQRLL
SGDTCDIDLHDLRKHTQYFGGFHNNHRVIVWLWEILANDFSVEERRLFLKFVTSCSKPPL
LGFEYLEPPFSIRCVEVNDDEDEGDTLGSVIRGFLAIRKEDPVSRLPTTSTCFNLLKLPN
YHRKSTLRDKLRYAIHCGTGFELS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttttatgcatgaacagtatcaattaaacgaaaaacgacacagctttttggaa
cgcgttcgctctgcaagagagcaacgggaagcagagcagcgactgaagcatgcggccaca
ttaattcaaaagcgttttctaggcattgatccgcggttttctgacacggaggaggaaaag
caacgaagcgagcttaaatgtaaaagaattgtcaatgatattgatattccaacgactgtc
cttgaagtgcacgtagcagtggagtatttattgcttgttcgttatttgcttttaagcagc
gaagcttcagatcttgaaaataatatagtaattgttgctctgacaccgtcgagtgcattt
tcatggctgcatttgatgaggaagattttatgcaaatgcattatttttttggctaatttg
agagatttaatgaatttagatcatgtgaatgatacaaaattaaatctttacttgcatctt
cttttatcattcacatcgacagcatcatgggctgcactgaaaagcgaagaaggtgtctgt
ttacatgtctttgctttaggtggaaagctgcgtccatcaatggacaaactatgtgagcgt
ctgcttattaatctagtgcatgcagatttttatccacaactctcggtaactgatattggt
gcaactctgctgttaaggccaatatgtcgtgatgaaatcgatgacaacgttttatcgcag
tatattcgttgcatattgactacgccagcattgatatggcatctgaagcacgaagcaaac
agttttaaattgaatttgttgaatgggaaattacttttgcgttgtatgcaatttttgcgc
gaacgttcagcgaatgacgaattttttgctaaacttgaagtaggcacagaagtgtgcatt
ttgggcaatatcgtgaacatggcatatttagaacatgaaattcttcagtcaaatcgagaa
ctgtttttggtacgcagtgaaatttatcaatctgatattgtgttgctgtcgtggaaacat
agccgtgaaaaagcagtctatgtcgtattggcaaccattttttggatggtacaaaaaacc
gataagtggaagattgcaggaagcattgccgtttgtaacaaagcaaattcaacttttgtg
ggatcggacgctgcaatactgtcaaagttgagaagaggtgctccaaagctgaagccgaaa
caggtaccatcgaagttgaaaccaacgcaagctgcaaaagaagcagttttcggtctagca
atgtatcagaatgttttgaatacattttcacctttgaaatatgatgttttatctggatta
tgttaccaagactttttattgcctaaaatttgggaaacgttggtagcaagtgacatcgaa
tcggctgtaaatcactacttgcaaatgtttgtatcagacaagtcgcagtctagtgctgaa
tcacttagttttattgttttctttgaatcggctacatacctgatgacaattttggacgat
tatgaactgtttactttggaaaagccattccaagtgagacaattgatcagtatggcacat
ttttgcaatttatttattttccgaagtgtttgggagaaaatagttggtagagatttgaag
tcgtcagtatttttaaatgaagttaatcgtggtaacaagaaagctttatttattattcaa
cgaataccgcatgttataccgcacagggagagaattaaattgtttcgtaaatatgttgct
tcagagaaagcatcgcttgccgcggctcggctttttgaagatcaaatgtcagttataata
actattcatcgggcgcgaattgttgaagatggattcaggcaactttcccagttgcctggg
agaattcttaaaggaattgtgcgagtgaaatttatcaatgagcagggtttggacgagcct
ggtattgatcaagacggtgtttttaaagaatttttagaagaagttattaaaaacattttt
gatccagcgttgaatttattcaagctcacaaacgaaggacatttatatccttcaccaact
tcatatattcatgagaattatcttttgctgtttgaattcatagggaaaatgctcggcaaa
gctgtttacgagggtatttgtgttgacatactgttagcatcattttttattaatcattta
atcggaagaacagcgtcgaaatatcatagttcaattgatgaattatcttcattggatgca
gatctgtacaagcagttgacatttattaagcattatgaaggcgatatgaatgatctagga
ttgacatttgcttgtgatgaagatattttgggagaggtagttacgcatgagctcaggcct
ggaggtagaacaattccggtgaccaaagagaacaagataagttacgtgcatttgatggct
cattatcgaatgtttgtgcaaataaaggatcaaatagctgcttttatgcgcggatttcat
gctatcatttctcctgaatggttgcggatgttttccgctgatgaatttcaacggctactg
tcgggcgatacttgtgacattgatttgcacgatttgcgcaagcatactcaatattttggt
ggctttcacaacaatcatcgtgttattgtttggctgtgggaaattttagccaatgatttc
tcagttgaagaaaggcgtttgtttttgaaatttgtaactagctgttctaagccaccgttg
ttaggttttgagtatcttgaaccaccattttcgattcgttgcgttgaggtgaacgacgat
gaggatgaaggagatacactgggcagtgtgattcgtggtttcttagcaattcgtaaagaa
gatccagtaagtcgtttaccgaccacttcaacttgctttaatctcctcaaattgccaaat
tatcaccgaaaatcaacattacgcgataagcttcgttatgcgatacactgtggcacaggg
tttgaattatcttga
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