Trichinella spiralis: Tsp_04726
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Entry
Tsp_04726 CDS
T01609
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tsp
Trichinella spiralis
Pathway
tsp03022
Basal transcription factors
tsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tsp_04726
09124 Replication and repair
03420 Nucleotide excision repair
Tsp_04726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_04726
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_04726
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Tsp_04726
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Tsp_04726
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
IBR
Motif
Other DBs
NCBI-GeneID:
10912583
NCBI-ProteinID:
XP_003369307
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MVREFIYSQWMERRWSMAVIDGKKHMKRVGELEVLEQDDSGSIQSSVAAITHLAKRKHII
DRVKGVRLGILRHLCILLDCSSVMIEKDLLPSRFISVIKALSLFVDDFFDQNPISQISII
TAKDKKTDKLVDFTGSARKHKEFLKAIAEEIPSGEFSLQNSLETANEMLRHMPSHSSREV
LVIMGSLSTCDPGDIEESLEILKRNNIRCNFIALSAEMYICKRIAKATNGKYAVIIDEDD
LKTLLSVFALPPVATTQLGANLIRMGNSDFRRGLKTRKVGHFVFGIHMKHGEGIGKLTCV
GFICPQCNFKYCFVPMECQICGLVLASAPHLARSYQHLYPILPFEEKAIDKHMKKELYCA
GCFSAIEVKVMFDVSYVCPGCRQDFCINCDLLIHETMHSCPGC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtcagagaatttatctattcgcaatggatggagagaagatggtcgatggcggttatc
gatgggaaaaagcatatgaaaagagttggtgagttggaagttttggagcaagatgattca
ggttccattcaaagcagtgttgctgccatcacacatttggctaaaagaaagcatataatt
gatagagttaaaggcgtgcgtcttggtattttacgtcacttatgtattcttcttgattgt
tcaagtgttatgattgaaaaagatttgttgccatcccgctttatatctgtaattaaggca
ctatccttatttgttgatgatttttttgatcaaaatccaattagtcagataagcataatt
acagcaaaagacaagaaaacagacaaattagttgattttacaggaagtgccaggaaacac
aaagagtttctgaaagcaatagctgaagaaattcctagcggggagttttctcttcagaat
tcattagaaactgcgaacgaaatgttaagacatatgccaagtcatagtagccgtgaagta
cttgttataatgggcagtttgagcacttgcgatccgggtgatatagaagaatctttggaa
attctgaaaagaaataatattcgttgcaattttattgcactttctgctgaaatgtacatt
tgtaaacgaatagcaaaagccacgaatgggaaatatgcggtaatcattgacgaagatgac
ttgaaaactttactttcagtgtttgcacttcctcctgttgctacgacacaacttggtgcc
aatttgattagaatgggtaatagtgatttccgaagaggattgaagacgcgaaaagttggt
cattttgtatttggtatccacatgaagcatggcgagggtattgggaaacttacttgcgtg
ggtttcatatgtccgcagtgtaatttcaaatattgttttgttcctatggaatgtcagatt
tgtggtcttgttcttgcatctgctcctcatttagctagatcttatcaacatctttatcca
attttgccattcgaagaaaaagccattgataagcatatgaaaaaagaattgtactgcgcc
ggttgcttttctgcgattgaagtgaaggtaatgtttgatgtgtcatacgtatgtccaggt
tgtagacaagacttctgcattaattgtgatttactcattcatgaaacaatgcacagctgt
cccggatgctga
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integrated database retrieval system
