Trichinella spiralis: Tsp_04894
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Entry
Tsp_04894 CDS
T01609
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_04894
03460 Fanconi anemia pathway
Tsp_04894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_04894
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Tsp_04894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_8
WHD_MUS81
EME1-MUS81_C
HVO_A0261_N
Motif
Other DBs
NCBI-GeneID:
10912756
NCBI-ProteinID:
XP_003369479
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MNDREVFLSTQSIQVTCRRQFPLNMLIEHWLGLMVTEAEKKDSKSAFSYRRALTSVRKFP
AQLHSVDEAKLLLQYFGDKMCMVLKKKLDEFCAEHGEPTLTNVAGYVGKSVGDKLLHSNA
NRAVSVVKKRRSSVESVEKCSFIPKNRSGAYAILRALYDALNLDNLEWVGTAELQRRAQA
YCDQYIGPSTRNQHYTAWMGRKTLIAHGLVESRRSRGNDYRLTGSGKRLAAQLDQMTNVV
ASPKPSSFVDEQHAEMTCESSSCATDSIALQNHLASQKADPGLEPRSTDWHCCAVCGTRH
VLLAADGYDVLMLVDNSETKGGPTGRAGPRSQLQSSKAKMKAALLRAGIDFEERELSVGD
YLWLARSKTDSRDEFVLDVIVERKRVDDLANSVLEKEGRYREQKFRLKRCGLKNVVYLVE
DFDGMDSMAEYKKLLVRGACAKTQLIDQFHFVRTHNLEETCCAQQLTVLQRFAEFDLNNC
KQKQWTVSEVFARMLLQFHGISAERAQQIVNKYPTVAHLLNAYATAERNIDGNEPTGEIP
LLAEIRSGMLGRNLGEKLAKKIQFFFTSTEPFQM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatagagaagtttttttgtcgacacagtcaattcaggtgacttgcagaaggcag
tttccgttgaatatgttaattgagcattggcttggcttgatggtcacggaagcggagaag
aaagattcgaaatctgcgttcagttatcgtcgcgctttgacgtcggttcgaaagtttccg
gcgcagttgcacagcgtggacgaggcgaaattgttgctccaatatttcggggacaagatg
tgcatggttttgaaaaagaaattggacgaattttgtgcagaacacggcgaaccgactttg
accaacgtcgccggctatgttggaaaaagcgtaggcgataaactgttgcacagcaatgct
aatagggcggtttcagtggtgaaaaagcgacgcagttctgtagaatcagttgaaaaatgc
tcatttattccaaaaaatcgttccggtgcgtatgcaattttacgggctctttacgacgcg
ttgaatttggacaacctagaatgggtgggcacggcggaattgcaacgccgggctcaagcc
tattgcgaccagtacattgggccgtcgacacgcaaccagcattacaccgcttggatgggt
cggaagactttgattgcgcacggtttggtggaaagccgacggagccgaggcaacgactac
cgtctgacagggagtggcaagcggctggctgctcaactcgaccagatgacgaacgttgtg
gcgtcgccaaaaccgtcatccttcgttgatgagcagcatgcggaaatgacgtgtgaatcg
agcagttgcgcaacggattcgattgctttgcagaaccacctggcaagtcagaaagcggat
cctggcctcgaaccacgttccaccgattggcattgttgtgcagtatgcggaacgaggcac
gttctgcttgcggcagatggttacgacgtgctgatgcttgtcgacaattcggaaaccaaa
ggcggacctaccggcagggcggggccgcgaagtcaactccagtcgagcaaagcgaaaatg
aaagcagccctgctcagggcgggaattgatttcgaagagcgtgaactgagcgtcggcgat
tacctctggctggccagatccaaaactgacagcagagatgaatttgtgctggatgtgatc
gtcgaacgcaaacgcgtcgacgatctggcgaacagtgtactggaaaaagaggggcgatat
cgtgagcagaaatttcgcctcaaacgttgcggcttgaagaatgtcgtttatttggttgaa
gacttcgacggcatggacagcatggccgagtataagaagctgctggtgcgaggtgcgtgc
gccaaaacccaactgatcgaccaatttcactttgttcgaacccataatttggaagagacg
tgttgtgcacagcagcttactgttttgcaacggtttgctgaattcgatttgaacaattgc
aagcaaaaacagtggactgtatccgaggtgtttgcgagaatgttgttgcaatttcacggc
atttcagccgaaagagcgcaacaaattgtgaacaaatacccaaccgtggcgcatctgttg
aatgcctacgcgacggccgaacgcaacatcgatggaaacgaacccactggagaaatacca
ctgttggctgagattcgtagtggaatgttgggtcgaaatttgggcgagaagttggcgaaa
aaaattcaatttttctttacttctactgaaccgtttcaaatgtga
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