KEGG   Trichinella spiralis: Tsp_05024
Entry
Tsp_05024         CDS       T01609                                 
Name
(RefSeq) protein DDI1 protein
  KO
K11885  DNA damage-inducible protein 1
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tsp03051]
    Tsp_05024
Proteasome [BR:tsp03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    Tsp_05024
SSDB
Motif
Pfam: Asp_protease gag-asp_proteas Asp_protease_2 UBA Ddi2_HDD RVP UBA_7 RVP_2 XPC-binding ubiquitin A_thal_3526 DUF2604 UBA_9 Rad60-SLD
Other DBs
NCBI-GeneID: 10912895
NCBI-ProteinID: XP_003369618
LinkDB
Position
Unknown
AA seq 400 aa
MFRMCIQITLVINQQDIINVRGKLKWTIKKFLRETKGVVPRLDESLYSITIMFNGELVSD
FERTIEDYGIKDADVLAVNVEPIAQSLGSDSLTSSAGPVDPAVATTLLSRMMNENPQMLQ
RIRSESPAVLQALQSGNIEEFRRIMQSFGVSNLSLSASDLMNSEAQRRIEDSIMQENIDH
TLQHAIEHVPESFARVVMLFIKCKVNGEEVKAFVDSGAESSVMSVKLAEKCNILRLVDKR
FRGIAKGVGTCAVIGRIHIAQLQIGNDFFPISLMVVEEDMFDIMLGLDMLKRHQCVIDLR
QNCLVIGTTGVSAPFLMEHELPAGLMEKKIELFEESMQISEEELSSSSSTQLPDEEDIAK
VMEFGFSREEAIKALRIRKNVKQAVAYLVAQNVNKHFPAE
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtttaggatgtgtattcaaatcactctggtaattaatcagcaagacattatcaatgtg
cgtggaaagctaaaatggacgatcaaaaaatttttgagagaaaccaaaggagttgtacct
cgtttagatgagtctttatattctattacaattatgtttaatggcgaactggtatcagat
ttcgagcgtacaattgaagactatggaatcaaagatgctgacgttctggcagtaaatgtg
gaaccgattgcccaatcattaggtagcgattcgcttacatcttctgcagggccagttgac
cctgccgtagcgacaacattgttgtctagaatgatgaatgagaatccacagatgcttcaa
agaattcgttcagaaagtccagctgtacttcaggcattacagtctggaaacattgaggaa
tttcgacgaataatgcaatcttttggagtatcaaacttatcactttccgccagtgatttg
atgaattcagaagcgcagcgtcgaattgaagatagtataatgcaggaaaatattgatcac
acattacaacacgccattgaacatgtaccggaatcatttgctcgtgtagtgatgctattt
ataaagtgtaaagtgaacggagaagaagtgaaagcctttgtagacagtggagccgagtct
tcagttatgtcagtaaagttggctgaaaaatgtaacatcctacgtttggttgataagcgt
tttcgtggaattgcaaaaggtgtcggtacgtgtgctgtgattggacgtattcatatagct
caacttcagatcggtaatgatttttttccaatttctttaatggttgttgaagaagatatg
tttgatatcatgcttggcttggatatgctgaaacgacatcaatgtgttattgatttacgt
cagaactgtctagtaattgggacaacaggagtgagtgccccatttttaatggaacacgaa
ttaccagcaggactaatggagaagaagatagagttgtttgaagagagtatgcaaataagt
gaagaagaattgtcgtcatcatcatcaactcaacttccggatgaagaggatattgctaaa
gttatggaatttggcttcagtcgagaagaagcgatcaaagcattgagaataagaaaaaat
gtgaaacaagctgtcgcatatcttgttgcgcagaacgttaacaaacattttcctgcagag
tga

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