Trichinella spiralis: Tsp_05025
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Entry
Tsp_05025 CDS
T01609
Name
(RefSeq) putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
KO
K12735
peptidyl-prolyl cis-trans isomerase-like 4 [EC:
5.2.1.8
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_05025
03110 Chaperones and folding catalysts [BR:
tsp03110
]
Tsp_05025
Enzymes [BR:
tsp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
Tsp_05025
Spliceosome [BR:
tsp03041
]
Complex C
Other components
PPlases
Tsp_05025
Chaperones and folding catalysts [BR:
tsp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
Tsp_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_5
PRA-PH
Motif
Other DBs
NCBI-GeneID:
10912896
NCBI-ProteinID:
XP_003369619
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSVLIETTVGDFVVDLYIKERPKTSMNFLKLCKLKYYNFSLFHTIQQNFIAQAGDPTETG
RGGESIFCQMYGDQARFFEMEAVPLLNHAKRGCLSMVNNGDNMHGSQFFVTLDEDLKYLN
GVHTVFGEITEGFDILEKLNDAICDKDNHPFQDIRIMHTIVLDDPFPDPDGVDFPSRSPS
PDERLLESGRIGVDEEVDEMKNKPEEEIAELIAAKEARTQAHILEMVGDLHYAEEKPPDN
VLFVCKLNAVTTEDDLEVIFGRFGPILSCEVIRDRKTGDSLQYAFIEFADAKHCENAYFK
MDNVLIDDRRIHVDFSQSVAKNFQWNRKLGNTCLKENSDGEENNMKRSCISTSSKSTRHS
SKKHPRDRAENYRKSEREKRRSRSRSRSQSRHSKNLHSRSKRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttaattgaaacaactgttggagactttgttgtcgacttatatattaaggag
agaccgaaaacttcaatgaattttttgaaattatgcaagctgaaatattataacttttct
ctcttccacaccattcagcaaaactttattgcccaagctggcgatcctacggaaactggt
cgaggaggtgaatctatattttgtcaaatgtacggtgatcaagctcgattttttgaaatg
gaagcagttcctttgttgaatcacgcaaaacgtggttgcttgtctatggtaaacaatggc
gataacatgcacgggtctcaattctttgttactcttgatgaggatttgaagtatttgaac
ggcgtgcatacagtttttggcgaaataactgaaggctttgacatattggaaaaattgaat
gatgctatttgcgacaaggataatcacccatttcaagatattagaataatgcatacaatc
gtattagacgacccttttccagatccggatggggtagattttccttctcgttctccatct
cctgatgaacgacttttggaaagtggacgaatcggtgtagatgaagaagtagatgaaatg
aaaaacaaaccagaagaagaaattgcagaactaattgctgctaaagaggcgcgaactcaa
gctcatattttggaaatggtaggtgatttgcattatgctgaagagaaaccacctgacaat
gtacttttcgtatgcaaattgaatgctgtaacaacggaagacgatcttgaagtgattttt
ggtcgattcggtcccattctgtcatgcgaagtaatacgagatcgaaaaactggagattct
ttgcagtacgcatttattgaatttgcagatgcgaaacattgcgaaaacgcatatttcaaa
atggacaatgtattgattgatgaccgtcgtattcatgttgattttagtcaatccgtggca
aagaatttccagtggaatcgaaagttaggaaatacgtgtttgaaggaaaatagcgatggc
gaagaaaataatatgaaaagatcgtgtatatcgacaagtagtaaatcgacgagacattca
tccaaaaaacatcccagagacagggctgaaaattatcgaaagtcagaaagggaaaaaaga
agatctagatcaagatcaagatcacaatctagacattcaaagaatcttcattcccgcagc
aaacggcgatga
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